Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0524 |
Symbol | araH |
ID | 4309188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 589493 |
End bp | 590509 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638148318 |
Product | L-arabinose transporter permease protein |
Protein accession | YP_772417 |
Protein GI | 115350578 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.299001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTCC GGGAAAACCT CGCCAGCGCA GCCGTGAAGC CGTCGGCCGA CGCGCTGGTT CCACAGCAGA GCGACCGCCA GAAGTGGTGG CAGCACCTCA CCGAATACAG CCTGATCGCG ATCTTCGCGG TGATGTTCGT CACGATGTCG CTGACGGTCG ATCACTTCTT TTCGATCGAC AACATGCTCG GCCTCGCGCT GTCGATCTCG CAGATCGGGA TGGTCGCGTG CACGATGATG TTCTGTCTGG CCTCGCGCGA CTTCGACCTG TCGATCGGCT CGACCGTCGC GTTCTCCGGC GTGCTGTGCG CGATGGTGCT GAACGCGACC GACAACACGT TCGTCGCGAT CATCGCGGCG GTCGCGGCCG GTGCGGCGAT CGGGTTCGTG AACGGCGCGG TGATCGCATA CCTGCGCATC AACGCGCTGA TCACGACGCT CGCGACGATG GAAATCGTGC GCGGGCTCGG CTTCATCGTG TCGAAGGGGC AGGCGGTCGG CGTGTCGTCG GACACGTTCA TCGCGCTCGG CGGGCTGTCG CTGTTCGGTG TATCGCTGCC GATCTGGGTC ACGCTCCTGT GCTTCATCGT GTTCGGCGTG CTGCTGAACC AGACCGTGTA CGGCCGCAAT ACGCTCGCGA TCGGCGGCAA CCCGGAGGCG TCGCGCCTGG CGGGGATCAA CGTCGAACGC ACGCGCGTCT ATATCTTCCT GATCCAGGGC GCGGTGACGG CGCTCGCCGG GGTTATCCTC GCGTCGCGCA TCACGTCGGG CCAGCCGAAC GCCGCGCAGG GCTTCGAGCT GAACGTGATC TCCGCCTGCG TGCTCGGCGG CGTGTCGCTG ATGGGCGGCC GCGCGACGAT CTCGGGCGTC GTGATCGGCG TGCTGATCAT GGGCACCGTC GAGAACGTGA TGAACCTGAT GAACATCGAC GCGTTCTACC AGTACCTGGT GCGCGGCGCG ATCCTGCTCG CGGCCGTGCT GCTCGACCAG CTGAAGAACC GCGGCGTACG CGACTGA
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Protein sequence | MQVRENLASA AVKPSADALV PQQSDRQKWW QHLTEYSLIA IFAVMFVTMS LTVDHFFSID NMLGLALSIS QIGMVACTMM FCLASRDFDL SIGSTVAFSG VLCAMVLNAT DNTFVAIIAA VAAGAAIGFV NGAVIAYLRI NALITTLATM EIVRGLGFIV SKGQAVGVSS DTFIALGGLS LFGVSLPIWV TLLCFIVFGV LLNQTVYGRN TLAIGGNPEA SRLAGINVER TRVYIFLIQG AVTALAGVIL ASRITSGQPN AAQGFELNVI SACVLGGVSL MGGRATISGV VIGVLIMGTV ENVMNLMNID AFYQYLVRGA ILLAAVLLDQ LKNRGVRD
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