| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0523 |
|---|
| Symbol | araG |
|---|
| ID | 4309187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 587939 |
|---|
| End bp | 589402 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638148317 |
|---|
| Product | L-arabinose transporter ATP-binding protein |
|---|
| Protein accession | YP_772416 |
|---|
| Protein GI | 115350577 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.431344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCAC TCGACGGCAT CTCGTTCGAC GTGCATGCGG GCGAGGTGCA TGGCCTGATG
GGCGAGAACG GCGCGGGCAA GTCGACGCTG CTGAAGATTC TCGGCGGCGA ATACCAGCCC
GATGCGGGCA GCGTGCTGGT CGACGGCCAG CCCGTGCATT TTTCGAGTGC GGCCGCGTCG
ATCGCGGCCG GCATTGCGGT GATTCACCAG GAACTGCAGT ACGTGCCCGA CCTGACGGTC
GCGGAGAACC TGCTGCTCGG CCGCCTGCCG AACGCGCTCG GCTGGGTGAA GAAGGGCGAG
GCGAAGCGCC ATGTGCGCGA ACGGCTCACC GCGATGGGCG TCGATCTCGA TCCCGACGCG
AAGCTCGGGC GGCTGTCGAT CGCGCAGCGG CAGATGGTCG AGATCTGCAA GGCGCTGATG
CGCAACGCGC GCGTGATCGC GCTCGACGAG CCGACGAGCT CGCTGTCGCA TCGCGAGACC
GAGGTGCTGT TCAAGCTCGT CGACGACCTG CGCGCGCAGG GCCGCGCGCT GATCTACATC
TCGCACCGGA TGGACGAGAT CTACCGGCTG TGCGATGCAT GCACCATCTT CCGCGACGGG
CGCAAGATCG CGTCGCACGA ATCGCTCGCC GACGTGCCGC GCGAGCAGCT CGTCGCCGAG
ATGGTCGGGC GCGAGATTTC GGACATCTAC CATTACGCGC CGCGCGCGCT CGGCGACGTG
CGGTTTTCGG CCGAAGGCGT CGACGGCCCG GCGCTGCGCG AACCGGCGAG CTTCTCGGTG
CGCGCGGGCG AGATCGTCGG GTTCTTCGGG CTGGTCGGCG CGGGGCGCAG CGAACTGATG
CGGCTCGTGT ACGGCGCGGA TCGCCGGCGC GCGGGCGAGC TGACGCTCGA CGGCAAGCGC
ATCGACGTGA AGCGCACCGG CGACGCGATC CGCCACGGCA TCGTGCTGTG TCCGGAGGAC
CGCAAGGAAG AAGGGATCAT CGCGATGGCG TCGGTCGCGG AGAACATCAA CATCAGCTGC
CGCCGCCATT CGCTGCGCGC CGGGCTCTTC ATCGACCGCA AGACCGAAAT CGAGACGGCC
GACCGCTTCA TCCAGCGGCT GAAGATCAAG ACGCCGAACC GCCGGCAGAA GATCCGCTTC
CTGTCGGGCG GCAACCAGCA GAAGGCGATC CTGTCGCGCT GGCTCGCGGA GCCCGACCTG
AAGGTCGTGA TCCTCGACGA GCCGACGCGC GGGATCGACG TCGGCGCGAA GCACGAGATC
TACGACGTGA TCTACCGGCT CGCGGAGCGC GGCTGCGCGA TCGTGATGGT GTCGTCGGAA
CTGCCGGAAG TGCTCGGCGT GTCCGACCGC ATCGTCGTGA TGCGCGAAGG CCGCATCGCG
GGCGAGCTGG CGCGCGCGCA GGCGAACGAG CATGCGGTGC TCAGCCTCGC GCTGCCGCAG
ACGAGCGTCG CCGAGGCGGC CTGA
|
|---|
| Protein sequence | MRALDGISFD VHAGEVHGLM GENGAGKSTL LKILGGEYQP DAGSVLVDGQ PVHFSSAAAS
IAAGIAVIHQ ELQYVPDLTV AENLLLGRLP NALGWVKKGE AKRHVRERLT AMGVDLDPDA
KLGRLSIAQR QMVEICKALM RNARVIALDE PTSSLSHRET EVLFKLVDDL RAQGRALIYI
SHRMDEIYRL CDACTIFRDG RKIASHESLA DVPREQLVAE MVGREISDIY HYAPRALGDV
RFSAEGVDGP ALREPASFSV RAGEIVGFFG LVGAGRSELM RLVYGADRRR AGELTLDGKR
IDVKRTGDAI RHGIVLCPED RKEEGIIAMA SVAENINISC RRHSLRAGLF IDRKTEIETA
DRFIQRLKIK TPNRRQKIRF LSGGNQQKAI LSRWLAEPDL KVVILDEPTR GIDVGAKHEI
YDVIYRLAER GCAIVMVSSE LPEVLGVSDR IVVMREGRIA GELARAQANE HAVLSLALPQ
TSVAEAA
|
|---|
| |