| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0497 |
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| Symbol | |
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| ID | 4311203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 560283 |
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| End bp | 563282 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638148291 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_772390 |
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| Protein GI | 115350551 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCA CCGACAACGC GACGTCCCAG TACGAGAGCG CCTCGAGCCG TCCGCTCGGC
GGGACCGAAC AGGGCGCGAA GGCGCTCGCG CCGCAGGCCA CGTTCGCCGA CTACAAGGTG
ATCCGCCGCA ACGGCAGTGT GGTGTCGTTC GAGCCTTCGA AGATCGCGAT CGCGGTGACC
AAGGCTTTCC TGGCCGTCAA CGGCGGGCAG GGCGCGGCAT CGGCGCGCGT GCGCGAGCAG
GTCGAGCAGC TCACGCACAA CGTCGTGCGC GCGCTCGTGC GCAGCCGTCC GAACGGCGGT
ACGTTCCATA TCGAAGACAT CCAGGACCAG GTCGAACTCG CGCTGATGCG CGGCGGCGAG
CACAACGTCG CGCGTGCGTA CGTGCTGTAT CGCGAGAAGC GCCACCTCGA GCGCCAGCAT
GCGGGCGAAG AAGCGGCCGC AGCGGGCGGC GAGGCGAGCG CGGGCATCAA CGTGGTCGAC
AACGGCGTCA CGCGCCCGCT CGACATGAAC GCGCTGCGCG AGCTGATCGT GTCGTCATGC
GCCGGTCTCG GCGCTGCGGT TAACCCTGAG CCGATCGTCG CGGAGACGGT GAAGAACCTG
TACGACGGCG TGCCGATGAG CCAGGTCTAC GACTCGGCGA TCCTCGCGGC GCGCACGATG
ATCGAGAAGG ACCCGGCGTA CAGCCAGGTC ACGGCCCGCA TCCTGCTGCA CACGATCCGC
CGCGAGATCC TCGGCGAGGA AGTGCTCCAG GCCGAGATGA CGACCCGCTA CACGGAATAC
TTCCCGCAGT TCCTGAAGCG CGGCGTCGAT GCCGGCCTGC TCGACGACAA GCTGCTGCAG
TTCGACCTGA AGCGTCTCGG CGAAGCGCTC GACGCGAACC GCGACCTGCA GTTCGGCTAC
CTCGGCCTGC AGACGCTGTA CGACCGCTAC TTCCTGCACG TCGAAGGCAC CCGCATCGAA
ATGCCGCAGG CATTCTTCAT GCGCGTCGCG ATGGGCCTGT CGCTGAACGA GATCGACCGC
GAAACGCGCG CGATCGAGTT CTACAACGTG CTGTCGAGCT TCGACTTCAT GAGCTCGACG
CCGACGCTGT TCAACTCGGG CACGCACCGC TCGCAGCTGT CGTCGTGCTA CCTGACGACG
GTCGCGGACG ACCTCGACGG CATCTATGAA GCGCTGAAGG AAAACGCGCT GCTGTCGAAG
TTCGCCGGCG GTCTCGGCAA CGACTGGACC CGCGTGCGTG CGCTCGGCTC GCATATCAAG
GGCACGAACG GCAAGTCGCA AGGCGTGGTG CCGTTCCTGA AGGTCGTCAA CGACACGGCC
GTCGCGGTCA ACCAGGGCGG CAAGCGCAAG GGCGCGGTGT GCGCGTACCT CGAATCGTGG
CACCTCGACA TCGAGGAGTT CCTCGAGCTG CGCAAGAACA CCGGCGACGA TCGCCGCCGC
ACGCACGACA TGAACACGGC GAACTGGATT CCCGACCTGT TCATGAAGCG CGTGATGGAA
GGCGCCGACT GGACGCTGTT CTCGCCGTCG ACCTGCCCGG ATCTCCACGA CAAGTTCGGC
GCGGAGTTCG AGGCGGCTTA CACGGCTTAC GAAGACAAGG TCGCGCGCGG CGAGATCAAG
CTGTTCAAGA AGATCCCGGC GCAGCAACTC TGGCGCAAGA TGCTCGGCAT GCTGTTCGAA
ACGGGCCACC CGTGGATCAC GTTCAAGGAT CCGTGCAACG TGCGTTCGCC GCAGCAGCAC
GTCGGCGTCG TCCATTCGTC GAACCTGTGC ACGGAAATCA CGCTGAACAC GAGCGACACC
GAAATCGCGG TGTGCAACCT GGGCTCGGTG AACCTCGTCG CCCACCTGGT GAAGCAGGCC
GACGGCAGCT ACGCGCTCGA CCACGACAAG CTCAAGCGCA CGATCAGCGT CGCGATGCGC
ATGCTCGACA ACGTGATCGA CATCAACTAC TACGCGGTGC CGAAGGCGCG TAACTCGAAC
CTGAAGCACC GTCCGGTCGG CATGGGCATC ATGGGCTTTC AGGACTGCCT GCACCTGCTG
CGCACGCCGT ACGCGTCGGA AGCGGCCGTC GAGTTCGCCG ATCGCTCGAT GGAAGCGGTC
TGCTACTACG CGTACTACGC GTCGACCGAG CTGGCCGAGG AACGCGGCCG CTACTCGAGC
TACCGCGGCT CGCTGTGGGA TCGCGGCATC CTCCCGCAGG ACACGCTGAA GCTGCTGACG
GAAGCACGCG GCGGCTACGT CGAGGTCGAC ACGTCGGAGT CGCTCGACTG GACGACGCTG
CGCTCGCGGA TCGCGGCACA CGGCATGCGC AACTCGAACT GCGTCGCGAT CGCGCCGACG
GCGACGATCT CGAACATCAT CGGCGTGTCG GCGTGCATCG AGCCGACCTT CCAGAACCTG
TACGTGAAGT CGAACCTGTC GGGCGAGTTC ACGGTGGTCA ACGAGTACCT CGTTCGCGAC
CTGAAGGAAC GCGGCCTGTG GGACGAAGTG ATGGTCGCCG ACCTGAAGTA CTTCGACGGC
ATGCTGTCGC GCATCGACCG CATCCCGGCC GACCTCCGCG CGATCTACGC GACCGCGTTC
GAAGTCGACC CGACGTGGCT TGTCGAAGCG GCATCGCGTC GCCAGAAGTG GATCGACCAG
GCGCAGTCGC TGAACATCTA CATGGGCGGC GCGTCGGGCA AGAAACTCGA CGAGGTCTAC
AAGCTCGCGT GGCTGCGCGG TCTGAAGACG ACCTACTACC TCCGCACGAT GGCGGCGACG
CACGTCGAGA AGTCGACGGT CGCGCACGGC GCGCTGAACG CGGTGCCGAC GGGCGGTGCG
GGCGGCTCGA GCAGCGGCGG CGCGCAAGGC GCGGCAGGCG GGTTCGGTGC GGCAGGCGGC
GATGCATCGT CGGGCGCGGT CAATGCGGCA GCGGCGCTGG CGCCGGTCGA AGCAGACGGT
CCGGTATGCA CGATGCGTCC GGGCGATGCG GGTTTCGACG AGTGCGAAGC CTGTCAGTAA
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| Protein sequence | MQTTDNATSQ YESASSRPLG GTEQGAKALA PQATFADYKV IRRNGSVVSF EPSKIAIAVT
KAFLAVNGGQ GAASARVREQ VEQLTHNVVR ALVRSRPNGG TFHIEDIQDQ VELALMRGGE
HNVARAYVLY REKRHLERQH AGEEAAAAGG EASAGINVVD NGVTRPLDMN ALRELIVSSC
AGLGAAVNPE PIVAETVKNL YDGVPMSQVY DSAILAARTM IEKDPAYSQV TARILLHTIR
REILGEEVLQ AEMTTRYTEY FPQFLKRGVD AGLLDDKLLQ FDLKRLGEAL DANRDLQFGY
LGLQTLYDRY FLHVEGTRIE MPQAFFMRVA MGLSLNEIDR ETRAIEFYNV LSSFDFMSST
PTLFNSGTHR SQLSSCYLTT VADDLDGIYE ALKENALLSK FAGGLGNDWT RVRALGSHIK
GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLESW HLDIEEFLEL RKNTGDDRRR
THDMNTANWI PDLFMKRVME GADWTLFSPS TCPDLHDKFG AEFEAAYTAY EDKVARGEIK
LFKKIPAQQL WRKMLGMLFE TGHPWITFKD PCNVRSPQQH VGVVHSSNLC TEITLNTSDT
EIAVCNLGSV NLVAHLVKQA DGSYALDHDK LKRTISVAMR MLDNVIDINY YAVPKARNSN
LKHRPVGMGI MGFQDCLHLL RTPYASEAAV EFADRSMEAV CYYAYYASTE LAEERGRYSS
YRGSLWDRGI LPQDTLKLLT EARGGYVEVD TSESLDWTTL RSRIAAHGMR NSNCVAIAPT
ATISNIIGVS ACIEPTFQNL YVKSNLSGEF TVVNEYLVRD LKERGLWDEV MVADLKYFDG
MLSRIDRIPA DLRAIYATAF EVDPTWLVEA ASRRQKWIDQ AQSLNIYMGG ASGKKLDEVY
KLAWLRGLKT TYYLRTMAAT HVEKSTVAHG ALNAVPTGGA GGSSSGGAQG AAGGFGAAGG
DASSGAVNAA AALAPVEADG PVCTMRPGDA GFDECEACQ
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