| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0479 |
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| Symbol | |
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| ID | 4308618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 542356 |
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| End bp | 543267 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148272 |
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| Product | prepilin peptidase |
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| Protein accession | YP_772372 |
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| Protein GI | 115350533 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.508512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCCG CGCCCCTGAC CACCGTTTTC GATTCGCCCG ACAGCACGTT GCTCGCGCTG
GCGATGCTGC CGCCCGCGGT GCAATATGCG TTCGCCGTCG TGCTCGGGCT GTGCGTCGGC
AGCTTCGTGA ACGTCGTCGC GCACCGGATC CCGGTGATGA TGCAGCGCGC ATGGCAGGCC
GAAATCGCCG AAGCGACGGG CAGCGCGAGC GCCGCGCCCG ACGACGGCTA TCCGCCGCAC
TACGATCTGT GGCGCCCGCG CAGCGCCTGT CCGCACTGCG GCCACGTGCT GCGCGCGTGG
GAAAACATCC CGCTCGTCAG CTACCTGATG CTGCGCGGAC GCTGCCGCCA GTGCGGCCAT
GCGATCGGCG TGGGCTATCC GCTCGTCGAG GTCGCGGGTG CGCTGCTCGC CGCCGGCTCG
CTCGCCGCGT TCGGCCCCAC CGCCGCCGCA CTCGCCGCGT TCGGGCTCTG CGCCGCGCTG
CTCGCGATGA GCGCGATCGA CATCCAGACC GGCTACCTTC CCGATTCGAT GACGCTGCCG
CTGCTGTGGG CAGGGCTCGC ACTGAACCTC GGCGGCACGT TCACGTCGCT GCGTTCGGCC
GTGGTCGGCG CAATGGCCGG CTACCTGTTC CTGTGGTCGA TCTACTGGCT ATTCAAATGG
CTGCGCGGCA TCGAGGGCAT CGGCTTCGGC GACCTGAAGC TGCTCGCCGC GCTCGGTGCA
TGGATGGGCT GGGCCGCGCT GCCGCAGGTC GTGCTGTTCG CCGCGGTGAC GGGCGCGATC
GTCGGGCTCG TCGCAACCTG GCGCGGGCGC ATGCGCTTCG AGGAGCCGAT TCCGTTCGGC
CCGTTCCTCG CGGCCGGCGG CGTCGCGACA CTGTTTTTCG GCACCCCTTT CTATCTGGCG
CTCGGCGGCT GA
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| Protein sequence | MTPAPLTTVF DSPDSTLLAL AMLPPAVQYA FAVVLGLCVG SFVNVVAHRI PVMMQRAWQA
EIAEATGSAS AAPDDGYPPH YDLWRPRSAC PHCGHVLRAW ENIPLVSYLM LRGRCRQCGH
AIGVGYPLVE VAGALLAAGS LAAFGPTAAA LAAFGLCAAL LAMSAIDIQT GYLPDSMTLP
LLWAGLALNL GGTFTSLRSA VVGAMAGYLF LWSIYWLFKW LRGIEGIGFG DLKLLAALGA
WMGWAALPQV VLFAAVTGAI VGLVATWRGR MRFEEPIPFG PFLAAGGVAT LFFGTPFYLA
LGG
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