Gene Bamb_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0444 
Symbol 
ID4311648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp495412 
End bp496710 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content66% 
IMG OID638148232 
Productphenylacetate-CoA ligase 
Protein accessionYP_772337 
Protein GI115350498 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR02155] phenylacetate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC CGCTACCGCT CGAGCCGATC GAGACCGCCT CACGCGACGA GTTGACCGCG 
CTGCAACTCG AACGCCTGAA ATGGTCGCTC CGGCATGCGT ATGAGCACTC CCCCGTCTAT
CGCCGCAAAT TCGACGAAGC GGGCGTGCAT CCCGACGACC TGAAAACGCT CGCGGATCTG
TCGCGCTTCC CGTTCACGAC CAAGAGCGAC CTACGCGACA GCTATCCATT CGGGATGTTC
GCGGTGCCGC AGGATCAGAT CTCGCGCATT CACGCGTCGT CGGGCACGAC CGGCAAGCCG
ACCGTCGTCG GCTACACGGC GCGCGACATC GACACGTGGG CGAATCTCGT CGCGCGCTCG
ATCCGCGCGG CCGGCGCGCG CCGCGGCGAC AAGGTTCACG TCAGCTACGG CTACGGGCTA
TTCACGGGCG GGCTCGGCGC GCACTACGGC GCCGAACGCG CGGGGCTGAC GGTGATCCCG
TTCGGCGGCG GCCAGACCGA GAAGCAGGTG CAGCTGATCC AGGATTTCCG CCCCGACATC
ATCATGGTGA CGCCGAGCTA CATGCTGTCG ATCGCCGACG AGATCGAGCG CCAGGGCCTC
GATCCCGCGC AAAGCTCGCT GCGCATCGGC ATCTTCGGCG CGGAACCGTG GACCAACGAC
ATGCGCGTGG CCATCGAGCA GCGCATGGGC ATCGATGCGG TCGATATCTA CGGGCTGTCC
GAAGTGATGG GTCCGGGCGT CGCGTCGGAA TGCGTCGAGA CCAAGGACGG CCCGACCATC
TGGGAAGACT ACTTCTATCC GGAAATCATC GATCCCGAGA CCGGCGAAGT ACTGCCGGAC
GGCGAACTCG GCGAGCTGGT GTTCACGTCG CTGACGAAGG AAGCGCTGCC GATCGTCCGC
TACCGGACAC GCGACCTCAC GCGTCTGCTG CCCGGCACCG CGCGCACGAT GCGCCGGATG
GAAAAAATCA CCGGGCGTTC GGACGACATG ATGATCGTGC GGGGCGTCAA CGTCTTTCCG
ACGCAAATCG AGGAACAACT GCTGAAGCAG CGCGCGCTCG CGCCGCACTA TCAGATCGTG
CTGACGAAGG AAGGGCCGCT CGACGTGCTG ACGCTCAACG TCGAGCCGTG TCCCGAAACG
GCCCCCGACA CCGCGGCGAT CCATGCGGCC AGGCAAGCGC TCGCGCACGA CATCAAGTCG
CTGATCGGCG TGACGGCCGT GATCAACGTG CTGCCCGTGA ACGGGATCGA GCGCTCGGTC
GGCAAGGCGC GCCGCGTGAT CGACAAGCGC AAGGGCTGA
 
Protein sequence
MTTPLPLEPI ETASRDELTA LQLERLKWSL RHAYEHSPVY RRKFDEAGVH PDDLKTLADL 
SRFPFTTKSD LRDSYPFGMF AVPQDQISRI HASSGTTGKP TVVGYTARDI DTWANLVARS
IRAAGARRGD KVHVSYGYGL FTGGLGAHYG AERAGLTVIP FGGGQTEKQV QLIQDFRPDI
IMVTPSYMLS IADEIERQGL DPAQSSLRIG IFGAEPWTND MRVAIEQRMG IDAVDIYGLS
EVMGPGVASE CVETKDGPTI WEDYFYPEII DPETGEVLPD GELGELVFTS LTKEALPIVR
YRTRDLTRLL PGTARTMRRM EKITGRSDDM MIVRGVNVFP TQIEEQLLKQ RALAPHYQIV
LTKEGPLDVL TLNVEPCPET APDTAAIHAA RQALAHDIKS LIGVTAVINV LPVNGIERSV
GKARRVIDKR KG