Gene Bamb_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0443 
Symbol 
ID4311647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp494048 
End bp495280 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content69% 
IMG OID638148231 
ProductMltA domain-containing protein 
Protein accessionYP_772336 
Protein GI115350497 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA GCAGGGCGAG CGCTACGAAA GCTTCGAGCG CGAAGATGAG CATCGGATAT 
TGGTCGAGAA AATCTGACAT GGCGGTTTCC ATCAAGAACG GACATTGTAT GTGGTTTGGG
CCCCGGCTGG CCGGCTGGAT TGCGGCGGCC GCGACGGCCG CACTGCTTGC CGCGTGCGGC
GGCGCGCCGA CGCGGACGTC GACGCTCAAG CCGCCGACCG GCACGGCGAT CGTGCCGGGG
CAGATCGCCG CGAAGCGGCT GACGCCGGTC GCCTGGCAGC AGGTGCCCGG CTGGCAGGAC
GATTCGCTGA TCGGCGCGGC GGCCGCGCTG CGGCAGAACT GCGTGCGGCT CGCGCGCCAG
CCGGCGTGGC AGCGCGCGTG CGCGGCGGCC GATCGCCTCG ACGAACTCGA CGTTAGCGGC
GCGCGTGCAT TCTTCGAAAC GTATTTCACG CCGTTCCAGC TGGCGAACAC CGACGGCACG
CTCGACGGGC TCGTGACCGG CTATTACGAG CCGCTGCTGC ACGGCTCGCG CGTGCGTCGC
GGTCCTTACC AGTACGCGCT GTACCGCTGG CCGGCAGGCT ATCGCGCCGG CGCCGCGCTG
CCCGCTCGCG CGCAGCTCGA GCGCGCCGGC ATCCTGAACG GCAACGAACT CGTGTGGGTC
GACGATCCGA TCGAGGCGTT CTTCCTGCAG GTGCAGGGTT CCGGACGCGT GCTGCTCGAC
GACGGCTCGG TGATGCGGGT CGGTTTCGGC GGGACCAACA ACCAGCCGTA CCGTTCGATC
GGCAAGTGGC TGCTCGATCG CGGCGAGTTG ACGCCTGCAC AGGCGACGAT GCAGGGCATC
AAGGCGTGGG CGAAGGCGAA CCCGACTCGC GTCGACGCGT TGCTCGACAC GAATCCGCGC
TTCGTGTTCT TCCGTGACAT GCCGACCAAG GAAGATGCGC CGCACGGCGG CGCGGACGGC
CCGATCGGCG CGCTCGGCGT GCCGCTCACG CCCGAGCGTT CGATCGCGGT CGATCCGTCG
TCGATCCCGC TCGGCACGCC CGTGTTCCTG CAGACCACGC GTCCGTTGAC GAATACGCCG
ATGAACCGGC TCGTGTTCGC GCAGGATACG GGCTCCGCGA TCCGGGGCGG CGTGCGGGCC
GACTATTTCT GGGGGCTCGG CGACGACGCC GGCGATCAGG CCGGGCGGAT GAAGCAGACC
GGCCGGATGT GGCTGCTGTT CCCGAATTCG TGA
 
Protein sequence
MKISRASATK ASSAKMSIGY WSRKSDMAVS IKNGHCMWFG PRLAGWIAAA ATAALLAACG 
GAPTRTSTLK PPTGTAIVPG QIAAKRLTPV AWQQVPGWQD DSLIGAAAAL RQNCVRLARQ
PAWQRACAAA DRLDELDVSG ARAFFETYFT PFQLANTDGT LDGLVTGYYE PLLHGSRVRR
GPYQYALYRW PAGYRAGAAL PARAQLERAG ILNGNELVWV DDPIEAFFLQ VQGSGRVLLD
DGSVMRVGFG GTNNQPYRSI GKWLLDRGEL TPAQATMQGI KAWAKANPTR VDALLDTNPR
FVFFRDMPTK EDAPHGGADG PIGALGVPLT PERSIAVDPS SIPLGTPVFL QTTRPLTNTP
MNRLVFAQDT GSAIRGGVRA DYFWGLGDDA GDQAGRMKQT GRMWLLFPNS