| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0388 |
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| Symbol | |
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| ID | 4309734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 434706 |
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| End bp | 435827 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148176 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_772281 |
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| Protein GI | 115350442 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0711605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATCA ATCTTCCCGA GTTGCTGACG CCGATCAGCG ATGCGTCGCC CAGCGGCGAC
GACCTGCTGT TCTCGAACGA ATTCGACGCG ATCCAGGACG CGCGGCGCTA CGATGATCCG
ACGCTCGACC AGGGCGAGTG GGTGACCGAG ATCAAGGAGG CCGACTGGGG CTTCGTCGTC
GATCACGCGG GCGAGTTGCT GCGCACGCGC ACCAAGGACC TGCGGCTCGC CGTGTGGCTG
ACCGAGGCGC TCGCGCTGGA GGACGGCATC ACCGGCCTCA CCGAAGGCTA TGCGCTGCTG
GAAGGCCTGT GCCGCGACTA TTGGGACACC GTACATCCGC TGCCGGAAGG CGACGACGTC
GAATACCGGC TCGGCAACGT CGCGTGGCTG TCCGGCCGCA CGGCCGAGTT GCTGCGCGGC
ATCCCCGTGA CGGAAGGCGC GTCGAACGCG TTCACCACGC TCGACTGGGA AGTCGCGCAG
CATGTGGCGC AGGCCGTGAA GCGCGACCCC GAACACGCGG ACGACATCGC ACGCGGCAAA
CCGTCGGTCG AGCAGGTCGA TGCGTCGCGG CGCGTGACGC CGATCGCGTT CTACACGACG
CTGCTCGCGA ATCTGAAGGC GTTCGAGTTC TCGCTCGATG CGTTCGAGGA GCGGCTCGTC
GAACGTGCGG GCGATTCGGC GCCGAGCTTC CGGCAGGCGC GAGACGCGTT CGAGACCGTG
TACCGGCTCG CCGAGCGCTT TGCGCGCGAG CAGGGCTATA CGGGCAGCGC GCCGCATGCG
CCGTCGGCAC CGCAGGCGCA GCCCGAGCGC CTCGAGCCGA GCTTCGGCGA CGCGTTCCCC
ATCCAGGAGA CCCATGTGCA GTCGCAGACC GCTCCGCGTC CTCCGATGAC GCAAATGATC
GCCGGCATCC AGAACCGCGC GCAGGCCGTC GACCAGCTGC GCGCCGTCGC GCGTTACTTC
CGGCAGACCG AGCCGCACAG CCCGGTCGCG TATCTCGCGG ACAAGGCCGC CGAATGGGCC
GACATGCCGC TGCACAAGTG GCTCGAGAGC GTCGTGAAGG ACGACGGGTC GCTGTCGCAT
ATCCGCGAGC TGCTGGGTGT GAGGCCTGAT GAGCAGTCGT GA
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| Protein sequence | MPINLPELLT PISDASPSGD DLLFSNEFDA IQDARRYDDP TLDQGEWVTE IKEADWGFVV
DHAGELLRTR TKDLRLAVWL TEALALEDGI TGLTEGYALL EGLCRDYWDT VHPLPEGDDV
EYRLGNVAWL SGRTAELLRG IPVTEGASNA FTTLDWEVAQ HVAQAVKRDP EHADDIARGK
PSVEQVDASR RVTPIAFYTT LLANLKAFEF SLDAFEERLV ERAGDSAPSF RQARDAFETV
YRLAERFARE QGYTGSAPHA PSAPQAQPER LEPSFGDAFP IQETHVQSQT APRPPMTQMI
AGIQNRAQAV DQLRAVARYF RQTEPHSPVA YLADKAAEWA DMPLHKWLES VVKDDGSLSH
IRELLGVRPD EQS
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