Gene Bamb_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0382 
Symbol 
ID4309728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp426364 
End bp427854 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content63% 
IMG OID638148170 
Producthypothetical protein 
Protein accessionYP_772275 
Protein GI115350436 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000637648 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGC AAACGGCTGC GGCCCAAGCG AGCGGCGCGG AATACGCCGC CGGGACTTCG 
TTGCTCGACG ATATCGTCGA GAAGAGCAAG GTCGCGAAAT CCGATTCCGA GCATGCGCGT
GCGAAGGACC TGATCGGCGA ACTCGTGCAC CAGGTGCTCG ACGGCACGGT GATCGTGTCG
GACAACCTGT CGGCGACGAT CGACGCGCGC GTCGCGGAGC TCGACCGCCT GATCTCCACG
CAGCTCTCCG CGGTGATGCA CGCGCCGGAA TTCCAGCGCC TGGAAAGCAC GTGGCGCGGG
ATGGACTACC TGGTCAAGGA AAGCAACACG GGCCAGACGA TCAAGATCAA GGCGCTGCAC
GCCCCGAAGC GCGACCTCGT GCGCGACTTC AAGGGCGCGA GCGAGTTCGA CCAGAGCGCG
CTGTTCAAGA AGGTCTACGA AGAAGAGTTC GGCACGTTCG GCGGCTCGCC GTTCGGCGCG
CTGATCGGCG ACTACGAGAT CTCGCGCCAG CCGGAAGACA TGTACTTCAT CGAGCAGATG
TCGCACGTCG CGGCCGCCGC GCATGCGCCG TTCATCGCGT CGGCGTCGCC GGAGCTGCTC
GGCCTCGAGT CGTTCTCCGA CCTCGGCAAG CCGCGCGATC TCGGCAAGGT GTTCGACACG
GTCGAATACG CGAAGTGGAA GTCGTTCCGC GATTCCGAGG ATTCGCGCTA CGTCGGCCTC
ACGCTGCCGC GCTTCCTCGG CCGCCTGCCG TTCAATCCGA AGGACGGCCA GACCGCGGAG
AACTTCAACT TCGTCGAGGA TGTGGACGGC ACCGAGCACG ACAAGTACCT GTGGTGCAAC
GCGGCGTGGG CATTCGCGGC ACGCCTGACC GCCGCGTTCG ACGACTTCGG CTGGTGCGCG
GCGATCCGCG GCGTCGAAGG CGGTGGCCTC GTCGAGGATC TGCCGACCCA CACGTTCAAG
ACCGACGACG GTGAAGTCGC GCTGAAGTGC CCGACCGAAA TCGCGATCAC CGATCGCCGC
GAGAAGGAGC TGAGCGACCT CGGCTTCATC CCGCTCGTTC ATTGCAAGAA CTCGGATTAC
GCTGCGTTCT TCGCCGCGCA ATCGGTGCAG AAACCGAAAA AATACAGCAC CGACAGCGCG
AATGCGAATG CCGTCCTGTC CGCCCAGCTT CAGTACATCT TCTCGGTATC GCGCGTCGCG
CACTACCTGA AGGCGATGAT GCGGGACAAG ATCGGCAGCT TCGCATCGGC GCAGAACGTG
GAGACTTTCC TCAACCGGTG GATTTCGCAG TACGTCCTGC TCGACGACAA CGCATCGCAG
GAACAGAAGG CGCAATTCCC GCTGCGCGAG GCATCCATAC AAGTGTCAGA GATTCCGGGG
AAGCCGGGCT CGTATCGTTC GGTCGCGTTC CTGCGCCCGC ACTTTCAGCT CGACGAACTC
TCGATTTCTC TGCGACTTGT CGCTGATCTG CCCAAACCGG CAAATTCATA A
 
Protein sequence
MNQQTAAAQA SGAEYAAGTS LLDDIVEKSK VAKSDSEHAR AKDLIGELVH QVLDGTVIVS 
DNLSATIDAR VAELDRLIST QLSAVMHAPE FQRLESTWRG MDYLVKESNT GQTIKIKALH
APKRDLVRDF KGASEFDQSA LFKKVYEEEF GTFGGSPFGA LIGDYEISRQ PEDMYFIEQM
SHVAAAAHAP FIASASPELL GLESFSDLGK PRDLGKVFDT VEYAKWKSFR DSEDSRYVGL
TLPRFLGRLP FNPKDGQTAE NFNFVEDVDG TEHDKYLWCN AAWAFAARLT AAFDDFGWCA
AIRGVEGGGL VEDLPTHTFK TDDGEVALKC PTEIAITDRR EKELSDLGFI PLVHCKNSDY
AAFFAAQSVQ KPKKYSTDSA NANAVLSAQL QYIFSVSRVA HYLKAMMRDK IGSFASAQNV
ETFLNRWISQ YVLLDDNASQ EQKAQFPLRE ASIQVSEIPG KPGSYRSVAF LRPHFQLDEL
SISLRLVADL PKPANS