| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0381 |
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| Symbol | |
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| ID | 4309727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 425833 |
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| End bp | 426348 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638148169 |
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| Product | hypothetical protein |
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| Protein accession | YP_772274 |
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| Protein GI | 115350435 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00433333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGA AAGAAAGCAT TCAGAAAAGC TTGCAGAAAA TTCGGCCGCC GCGCGTCCAA
TTGACCTACG AGGTCGAGAA GGGCGATGCG ATCGAGGTGA AGGAACTGCC GTTCGTCGTC
GGGGTCGTCG GCGATCTGGC GGGCCAGTCG GAAATCGAGC AGCCGAAGCT GCGCGACCGC
AAGTTCGTCA ATATCGACCG CGACAACTTC GACGACGTGA TGAAGGCGAT CGAGCCGCGC
GCCGCGTTTC AGGTGGAAAA CCGCCTGAGC CCGGAAGGCG GCAAGTTCGC GGTCGACCTG
AAGTTCCGTT CGCTGTCGGA TTTCAGCCCG GACGAAGTCG TCGAACAGGT CGAGCCGCTG
CGCCGCCTGC TCGACGCGCG TTCGAAGCTC GCCGACCTGC GCAACAAGCT CGCCGGCAAC
GACAAGCTCG AGGATCTGCT GTCGGAAGTG CTGAAGAACA CGCAGCAGCT GCAGGAGCTC
GCGAAGGGCA CGGGCGGCGA CAAAGACGGC GAATGA
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| Protein sequence | MAKKESIQKS LQKIRPPRVQ LTYEVEKGDA IEVKELPFVV GVVGDLAGQS EIEQPKLRDR
KFVNIDRDNF DDVMKAIEPR AAFQVENRLS PEGGKFAVDL KFRSLSDFSP DEVVEQVEPL
RRLLDARSKL ADLRNKLAGN DKLEDLLSEV LKNTQQLQEL AKGTGGDKDG E
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