Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0377 |
Symbol | |
ID | 4309723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 421936 |
End bp | 422718 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638148165 |
Product | hypothetical protein |
Protein accession | YP_772270 |
Protein GI | 115350431 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.241658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACG CGCCCTCCCT GTTCGGCGAC AACACGCCGG CACCGCTGCA GACCCCGGCG TCGACCGACG CCGCGTTCCA GGCCCGTTCG CTGGTCGACC TGCTGTACGA CGGGTTCTTC ATGCTGTTCC TGCTCAAGAA CGGCCGCGAG CCGGACAGCG CGAGCGAGTT CAGCACGAAG ATCCAGGAAT TCCTGTCGGA TTTCGAGCGC GGCGCGAAGA AGCTGAATAT CGCCGCGGAA GACGTGTACG CCGCGAAGTT CGCGTATTGC GCGGCGGTCG ATGAAATGGT GCTGTCGTCG CAGTTCAAGA TCCGGACCGA CTGGGAGCGC CGGCCGCTGC AGCTCGTGCT GTTCGGCGAG CAGCTCGCGG GGGAGAAGTT CTTTCAGTAT CTCGAGGAAT GTCGCGCGCA GGGCGCGGCG CGGTTGCAGT CGCTCGAGGT GTTTCATATG TGCCTGCTGC TCGGCTTCCA GGGCAGGTAT CTGCTCGAGG GGCCGGAGAA GCTGGCTTAT CTCACCGCGC GGCTAGGCGA CGAGATCGCG CATATGAAAG GCAAGCGCGC GCCGTTCGCG CCGCATTGGC CGCTGCCCGA TCAGATCGCG CATCGGTTGA AGCGTGAGGT GCCGGTGTGG GCGATCGGGG CGGTGTTCGC GCTCGTGGCG CTGCTGGGGT TTCTCGGGCT CAATACGTAT CTCAAGGACA AGACGCTGCA GGCGTTGGCG CCTTACTCGC AAGTCGTCAA GGTCGGACCG GAGTCTGCGA ATTTGACGAT TTCGTTGCCT TGA
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Protein sequence | MSYAPSLFGD NTPAPLQTPA STDAAFQARS LVDLLYDGFF MLFLLKNGRE PDSASEFSTK IQEFLSDFER GAKKLNIAAE DVYAAKFAYC AAVDEMVLSS QFKIRTDWER RPLQLVLFGE QLAGEKFFQY LEECRAQGAA RLQSLEVFHM CLLLGFQGRY LLEGPEKLAY LTARLGDEIA HMKGKRAPFA PHWPLPDQIA HRLKREVPVW AIGAVFALVA LLGFLGLNTY LKDKTLQALA PYSQVVKVGP ESANLTISLP
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