| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0346 |
|---|
| Symbol | |
|---|
| ID | 4309239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 390416 |
|---|
| End bp | 391036 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638148134 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_772240 |
|---|
| Protein GI | 115350401 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.383588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGC TCAAATCGTT CATTTCGCTG CTGGCGCTGA TCAACCCGGT CGGCGCCGTG
CCGTTCTTCC TGAGCCTGAC CGCGCAGCAA ACGGACGGCG AGCGGCGCCG CACGATCCGG
ATCGCGTCGG TGTCGGTGTT CTGCGTGATG ACGGTGACGA CGCTGCTCGG GCAGCAGATC
ATCGACTTCT TCGGCATTTC GGTCGGCTCG CTCGAAGTGG GCGGCGGGAT CATCATGCTG
CTGATGGCGA TCAACATGCT GAACGCGCAG ATCGGCAACA CGCGATCGAC GCCGGAGGAG
CGCTACGAGG CCGAGTCGAA GGACAACATC GCGGTCGTGC CGCTGGCGAT TCCGCTGCTC
ACGGGCCCCG GCTCGATCAG CACGGTGATC ATCTATGCGG CGAACTCGCA TCACTGGTAT
GAGCGGGCCG GGCTGGTCGC GATCGGCGCG GCCCTGGCTT TTCTGTGTTT CGTCGCGATG
CGGCTCGCCG AGCCGATCGC GAACTGGATC GGCCGCACCG GCATCAACAT CGCCACGCGG
CTGATGGGTC TGATGCTGTC GGCGCTGGCG GTGGAATTCA TCGTCAACGG ACTGAGGGCG
CTACTGCCTG CACTGAGATG A
|
|---|
| Protein sequence | MDLLKSFISL LALINPVGAV PFFLSLTAQQ TDGERRRTIR IASVSVFCVM TVTTLLGQQI
IDFFGISVGS LEVGGGIIML LMAINMLNAQ IGNTRSTPEE RYEAESKDNI AVVPLAIPLL
TGPGSISTVI IYAANSHHWY ERAGLVAIGA ALAFLCFVAM RLAEPIANWI GRTGINIATR
LMGLMLSALA VEFIVNGLRA LLPALR
|
|---|
| |