| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0318 |
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| Symbol | ugpQ |
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| ID | 4308792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 359283 |
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| End bp | 360047 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638148106 |
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| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_772212 |
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| Protein GI | 115350373 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.204658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCC GTACCGACTG GCCCTATCCG CGCGTGGTCG CCCATCGCGG CGGCGGCACG
CTCGCGCCGG AGAACACGCT CGCCGCGCTC GACGAGGGCG CGCGGCGCGG GCACCGGATG
GTCGAGTTCG ACGCGAAGCT GTCCGCCGAC GACGTGACGT TCCTGCTGCA CGACGACACG
GTCGAGCGCA CGTCGAACGG CAGCGGGCCG GCGGCGGGCA TGCGTTATGC GGCACTGGCC
GCGCTCGACG CCGGCGCGTG GTTCGACGCG CGCTTCGCGG GCGAGCGGAT GCCGACGCTC
GATGCGGCGG CGGCGTGCTG CATCGCGCAC GGGCTCGCCG CGAATGTCGA GATCAAGCCG
TGCCCGGGGC GCGAGCGCGA AACCGGGCAG CGCGTGGCAG CCGACGCGGC TGCGTACTGG
CGCGATGCGG CGGTGCCGCC GCTGCTGTCG TCGTTCTCGT TCGATGCGCT GCAACAGGCG
CGCGCGACCG CGCCGGCGCT GCCGCGCGGG ATGCTCTACG AAGCCGTGCC GGACGACTGG
CACGCCCAGG TGGTCGGAGC GCTCGGCTGC GTTTCGTTGC ATGCAGACCA CACACGGCTC
GACGAATCGC TCGTGCGCGC GATCAAGGCG GCCGGGCTGC GCATCCTGGT CTACACGGTC
AACGACCTCG AACGGGCGTG CGAACTCGTG CGCTGGGGCG TCGACGCGGT CTGCACGGAC
CGGATCGACC TGATCGGCCC GACGGCACTC GACGACCTCG TATAG
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| Protein sequence | MTSRTDWPYP RVVAHRGGGT LAPENTLAAL DEGARRGHRM VEFDAKLSAD DVTFLLHDDT
VERTSNGSGP AAGMRYAALA ALDAGAWFDA RFAGERMPTL DAAAACCIAH GLAANVEIKP
CPGRERETGQ RVAADAAAYW RDAAVPPLLS SFSFDALQQA RATAPALPRG MLYEAVPDDW
HAQVVGALGC VSLHADHTRL DESLVRAIKA AGLRILVYTV NDLERACELV RWGVDAVCTD
RIDLIGPTAL DDLV
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