| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0300 |
|---|
| Symbol | |
|---|
| ID | 4311304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 339170 |
|---|
| End bp | 341392 |
|---|
| Gene Length | 2223 bp |
|---|
| Protein Length | 740 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638148088 |
|---|
| Product | ResB family protein |
|---|
| Protein accession | YP_772194 |
|---|
| Protein GI | 115350355 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTA CCACGTCGGG GTTGCAGTCG AAGTCGGGTC AAAGTGCGTC CAGGCGCGCG
ATCGAGCTGG TGAGCTCGAT GCGCTTCGCG ATCGCGCTGC TGGTGGTGTT GTCGATCGCG
AGCATCATCG GCACGGTCCT GACCCAGGAT GACCCGTATC CGAACTACGT GAACCAGTTC
GGGCCGTTCT GGGCGGACAT CTTCCGCTCG CTGGGCCTGT ACAACGTGTA CAGCGCGTGG
TGGTTCATGC TGATCCTGAT CTTCCTCGTC ACGTCGATCT CGCTGTGCGT GATCCGCAAC
GCGCCGAAGA TGCTCGCCGA TGCGAAGAGC TGGAAGGACA AGGTCCGCGA AGGCAGCCTG
CGCGCGTTCC ATCACAAGGC CGAATACACG GCGTCCGGCA CGCGTGCGAC CGTTGCGGCC
ACGCTCGCCA CGTTCGTCGC GAAGGCCGGC TACAAGCACG TGGTGCGCGA AACCGACGGC
GCGACGCTGA TCTCCGCGAA GCGCGGCGCG CTGACGAAGT GGGGCTACAT CTCCGCGCAC
CTCGCGATCG TCGTGATCTG CATCGGCGGC CTGCTCGACA GCAACCTGCC CATCAAATTC
CAGATGTGGA TGTTCGGCAA GAGTCCGGTC AACACGAGCG CGACGATCAG CGAGATCTCG
CCCGACCACC GGTTGTCCAC GTCGAACCCG ACGTTCCGCG GCTACGCGTG GGTGCCGGAA
GGCCAGTTCG TGTCGACCGC GATCCTGAAC CAGCCGAGCG GCTCGCTGAT CCAGGACCTG
CCGTTCTCGA TCCAGCTCAA CAAGTTCATC GTCGACTACT ACACGACGGG GATGCCGAAG
CTGTTCGCGA GCGACATCGT CGTGATCGAT CGCGAGACGG GCCAGAAGAT TCCGGCGCGC
GTCGAGGTCA ACAAGCCGTT CACGTACAAG GGCGTGTCGA TCTACCAGTC GAGCTTCCAG
GACGGCGGCT CGCAGATGCA GATGACGGCC TACCCGATGA CGGGCGACAA CGCGAAGACC
TTCGCGGTAA AGGGCACGAT CGGCAGTACG GCGCCGCTGC AGATGCCGGG CAGCGACGGC
GACACGATCG AGTTCTCCGA CTTCCGTGCG ATCAACGTCG AAAACATGGC CGACGCGAAC
GGCAAGCCGG ACGTGCGCGG CGTCGCGAAG ACGGAGTCGC TGAAGGAGGT GTTCGACGAG
CGGCTCGGCT CGGGCGCGAA GACGTCGAAG CCGATGCAGC TGCACAACAT CGGCCCGTCG
GTGCAGTACA AGATTCGCGG CAAGGACGGC CAGGCGCGCG AGTTCAACAA CTACATGCTG
CCCGTCGACA TGGGCGGCAC GCGCGTGTTC CTCGCCGGCG TGCGCGGGAG CCCGAACGAT
CCGTTCCGCT ACATGCGGAT TCCGGCCGAC AGCCAGGATT CGATCGGCGA ATGGATGCGC
CTGCGCGCCG CGCTCGAGGA TCCGGCCGTG CGCGCCGACG CCGCCGCGCG TTTCGCGCAG
CGTTCGCTGC CGACGACCGA AGCGTCGCTG CGCGGCCGCC TGCAAGATAG CGCGTTCAAG
GTGCTGACCC TCTTCGCGGC GAGCGACGAC AGCGTGGGTC GCGGTGCCGA CGGCCAGCCG
ATCGGCGGCT TCCAGGCGGT GGCGACGTTC ATCGACCGGT CGGTGCCGAA GGCCGAGCAG
GAAAAGGCGG CGAGCCTGCT GCTGCGCATG CTCGAGGGCT CGATGTGGGA GGTCTGGCAG
ATCGCGCGCG AGCGCGCCGG CGAGCCGGCC GCCCAGCAGG GCACCGACAC GATCCGCTTC
GTGCAGAACG CGATCAATGC GCTATCGGAC AGCTTTTTGT ATGGATCGCC GGTCTATTTG
CAGCTTGACT CCTTCAAGCA GGTGCAAGCT TCGGTATTTC AGTTGACGCG CGCACCTGGC
AAGAATCTGG TGTATCTTGG CAGCCTGCTG TTGGTCGCCG GCATCTTCTC GATGTTCTAC
GTGCGCGAGC GGCGCCTCTG GTTCTGGCTC AAGGATGCCG GTTCGGGCGT CGATGTGGTG
ATGGCGATGT CCACGGCCCG CAAGACCTTC GATTTCGAGA AAGAATTCGT GCAGACGCGC
GACGCGGCCG GCGCCGCCTT GCGCGCCGCA CCGCGCGACG CCGCGCCCAC AGGCGCGGCA
GCGACTGCCC GTCCGCCCGC CGGCGGCGGT TCCGATTCCG ATTCCGAGAA CTCCACCCGG
TAA
|
|---|
| Protein sequence | MSVTTSGLQS KSGQSASRRA IELVSSMRFA IALLVVLSIA SIIGTVLTQD DPYPNYVNQF
GPFWADIFRS LGLYNVYSAW WFMLILIFLV TSISLCVIRN APKMLADAKS WKDKVREGSL
RAFHHKAEYT ASGTRATVAA TLATFVAKAG YKHVVRETDG ATLISAKRGA LTKWGYISAH
LAIVVICIGG LLDSNLPIKF QMWMFGKSPV NTSATISEIS PDHRLSTSNP TFRGYAWVPE
GQFVSTAILN QPSGSLIQDL PFSIQLNKFI VDYYTTGMPK LFASDIVVID RETGQKIPAR
VEVNKPFTYK GVSIYQSSFQ DGGSQMQMTA YPMTGDNAKT FAVKGTIGST APLQMPGSDG
DTIEFSDFRA INVENMADAN GKPDVRGVAK TESLKEVFDE RLGSGAKTSK PMQLHNIGPS
VQYKIRGKDG QAREFNNYML PVDMGGTRVF LAGVRGSPND PFRYMRIPAD SQDSIGEWMR
LRAALEDPAV RADAAARFAQ RSLPTTEASL RGRLQDSAFK VLTLFAASDD SVGRGADGQP
IGGFQAVATF IDRSVPKAEQ EKAASLLLRM LEGSMWEVWQ IARERAGEPA AQQGTDTIRF
VQNAINALSD SFLYGSPVYL QLDSFKQVQA SVFQLTRAPG KNLVYLGSLL LVAGIFSMFY
VRERRLWFWL KDAGSGVDVV MAMSTARKTF DFEKEFVQTR DAAGAALRAA PRDAAPTGAA
ATARPPAGGG SDSDSENSTR
|
|---|
| |