Gene Bamb_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0299 
Symbol 
ID4311303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp338315 
End bp338968 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID638148087 
Productcytochrome c, class I 
Protein accessionYP_772193 
Protein GI115350354 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.194352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAC TGTGCAAGTC TCTGATGGTG CTTCAGGTTG CAGCAGGGTT CGTAGGTTTC 
GTAGCGGAGG CAAACGCGGC GGATGCGGCA AAGCCGGATC TGGACCGCGG CAAGGCGATT 
GCCGGGCAGG TGTGTGCGTC ATGTCACGGC GCCGACGGCA ACAGCGCGTC GGGCAGTTTC 
CCGAAGCTCG CCGGCCAGCA TCCCGAATAT CTGGTCAAGC AGTTGAACGA CTTCAAGACC 
CAGTCGGGCG CGAAGGGGCC GGCGCGGACC AATCCGGTAA TGGTCGGGTT CGCGAGCGCG 
TTGAGTGCGG ACGACATGCG CAACGTCGCC GCCTATTACG GCTCGCAGGC AACGAAGCTC 
GGCACCGCGC GCGATGCGGC GACCGTGCCG ATCGGCCAGA AGATCTATCG CGGCGGCATC 
GCGGAAAAGG GTGTCCCCGC CTGCGCGAGC TGTCACGGGC CGACGGGGCA GGGGCTGCCG 
GTCCAGTACC CGCGTCTGTC GGGGCAGTGG GCCGATTACA CGGTTGCCCA GTTGACCGCG 
TTCCAGCAGG GTGCCGGCGC GCGCAACAAC AACGAGGCGA TGCATCAGAT CGCATCGCGT 
CTGTCGGATA ACGAGATCAA GGCCGTCGCG GATTACATCG CGGGCCTGCG TTGA
 
Protein sequence
MNRLCKSLMV LQVAAGFVGF VAEANAADAA KPDLDRGKAI AGQVCASCHG ADGNSASGSF 
PKLAGQHPEY LVKQLNDFKT QSGAKGPART NPVMVGFASA LSADDMRNVA AYYGSQATKL 
GTARDAATVP IGQKIYRGGI AEKGVPACAS CHGPTGQGLP VQYPRLSGQW ADYTVAQLTA 
FQQGAGARNN NEAMHQIASR LSDNEIKAVA DYIAGLR