Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0282 |
Symbol | rplF |
ID | 4310292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 326616 |
End bp | 327146 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638148070 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_772176 |
Protein GI | 115350337 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00574931 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGAG TAGGTAAAAG CCCGATCGCG CTGCAAGGCG CGGAAGTCAA GCTGGCCGAC GGTGCAATCA CCGTCAAGGG CCCGCTGGGC ACCATCACGC AAGCGATCAA TCCGCTCGTG AACGTGGCGA ACAACGACGG CACGCTGAAT CTGTCGCCGG TCGACGAAAG CCGCGAAGCA AATGCACTGT CGGGCACGAT GCGCGCGATC ATCGCGAATG CCGTGCAAGG CGTGACCAAG GGTTTCGAGC GCAAGCTGAC GCTGGTTGGC GTCGGTTATC GTGCGCAGGC GCAAGGCGAC AAGCTGAACC TGTCGCTGGG TTTCTCGCAC CCGGTGGTGC ACCAGATGCC GGAAGGCGTC AAGGCTGAAA CCCCGACGCA AACCGAAATC GTGATCAAGG GGATCAACAA GCAACAAGTC GGTCAAGTAG CTGCGGAAGT TCGCGGTTAC CGTCCGCCGG AGCCCTACAA GGGCAAGGGC GTGCGCTATT CCGACGAGGT TGTGATCCTC AAAGAAACGA AGAAGAAGTA A
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Protein sequence | MSRVGKSPIA LQGAEVKLAD GAITVKGPLG TITQAINPLV NVANNDGTLN LSPVDESREA NALSGTMRAI IANAVQGVTK GFERKLTLVG VGYRAQAQGD KLNLSLGFSH PVVHQMPEGV KAETPTQTEI VIKGINKQQV GQVAAEVRGY RPPEPYKGKG VRYSDEVVIL KETKKK
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