| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0267 |
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| Symbol | rplC |
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| ID | 4310277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 319575 |
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| End bp | 320228 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638148055 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_772161 |
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| Protein GI | 115350322 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000416166 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAGCC TTGGACTCGT AGGTCGCAAG GTTGGCATGA CCCGTATCTT CACGGCTGAA
GGGGATTCGA TTCCCGTCAC CGTGCTGGAC GTGTCGGACA ACCGCGTGAC GCAGATCAAG
ACTGTTGAAA CCGACGGCTA CACGGCCGTG CAGGTTGCAT TCGGCTCCCG CCGCGCATCG
CGCGTGACGA AGCCGCTGGC AGGTCATCTC GCCAAAGCCG GTGTCGAAGC CGGTGAAATC
CTCAAGGAAT TCCGCATTGA CGCGGCCAAG GCAGCCGAGC TGTCGAATGG CGCCGTGGTC
GGTGCCGATC TTTTCGAAGT AGGCCAGAAG GTCGACGTGC AAGGCGTGTC GATCGGTAAG
GGCTACGCCG GTACGATCAA GCGTTACAAC TTCTCCTCCG GCCGTGCCAC GCACGGTAAC
TCGCGCTCGC ACAACGTGCC GGGCTCGATC GGTATGGCGC AGGATCCGGG TCGTGTTTTC
CCGGGTAAGC GCATGACGGG TCACCTCGGT GACGTTACGG TGACGGTGCA GAACCTCGAA
ATCGCTCGTA TCGACGCAGA GCGCAAGCTG CTGCTCGTCA AGGGCGCGAT TCCGGGCGCG
AAGGGCGGCA AGGTTTTCGT GACGCCGGCC GTCAAGACCA AGGGGGCGAA ATAA
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| Protein sequence | MMSLGLVGRK VGMTRIFTAE GDSIPVTVLD VSDNRVTQIK TVETDGYTAV QVAFGSRRAS
RVTKPLAGHL AKAGVEAGEI LKEFRIDAAK AAELSNGAVV GADLFEVGQK VDVQGVSIGK
GYAGTIKRYN FSSGRATHGN SRSHNVPGSI GMAQDPGRVF PGKRMTGHLG DVTVTVQNLE
IARIDAERKL LLVKGAIPGA KGGKVFVTPA VKTKGAK
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