Gene Bamb_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0267 
SymbolrplC 
ID4310277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp319575 
End bp320228 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID638148055 
Product50S ribosomal protein L3 
Protein accessionYP_772161 
Protein GI115350322 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.16166e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGCC TTGGACTCGT AGGTCGCAAG GTTGGCATGA CCCGTATCTT CACGGCTGAA 
GGGGATTCGA TTCCCGTCAC CGTGCTGGAC GTGTCGGACA ACCGCGTGAC GCAGATCAAG
ACTGTTGAAA CCGACGGCTA CACGGCCGTG CAGGTTGCAT TCGGCTCCCG CCGCGCATCG
CGCGTGACGA AGCCGCTGGC AGGTCATCTC GCCAAAGCCG GTGTCGAAGC CGGTGAAATC
CTCAAGGAAT TCCGCATTGA CGCGGCCAAG GCAGCCGAGC TGTCGAATGG CGCCGTGGTC
GGTGCCGATC TTTTCGAAGT AGGCCAGAAG GTCGACGTGC AAGGCGTGTC GATCGGTAAG
GGCTACGCCG GTACGATCAA GCGTTACAAC TTCTCCTCCG GCCGTGCCAC GCACGGTAAC
TCGCGCTCGC ACAACGTGCC GGGCTCGATC GGTATGGCGC AGGATCCGGG TCGTGTTTTC
CCGGGTAAGC GCATGACGGG TCACCTCGGT GACGTTACGG TGACGGTGCA GAACCTCGAA
ATCGCTCGTA TCGACGCAGA GCGCAAGCTG CTGCTCGTCA AGGGCGCGAT TCCGGGCGCG
AAGGGCGGCA AGGTTTTCGT GACGCCGGCC GTCAAGACCA AGGGGGCGAA ATAA
 
Protein sequence
MMSLGLVGRK VGMTRIFTAE GDSIPVTVLD VSDNRVTQIK TVETDGYTAV QVAFGSRRAS 
RVTKPLAGHL AKAGVEAGEI LKEFRIDAAK AAELSNGAVV GADLFEVGQK VDVQGVSIGK
GYAGTIKRYN FSSGRATHGN SRSHNVPGSI GMAQDPGRVF PGKRMTGHLG DVTVTVQNLE
IARIDAERKL LLVKGAIPGA KGGKVFVTPA VKTKGAK