Gene Bamb_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0252 
Symbol 
ID4309477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp298436 
End bp299626 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID638148039 
Productelongation factor Tu 
Protein accessionYP_772146 
Protein GI115350307 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.68752e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGG GTAAATTTGA GCGGACCAAG CCGCACGTCA ACGTTGGAAC GATCGGTCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATCACGA CGGTGCTGAC GAAGAAGTTC
GGCGGCGAAG CGAAGGCTTA CGACCAGATC GACGCGGCAC CGGAAGAAAA GGCGCGCGGC
ATCACGATCA ACACGGCACA CGTCGAGTAC GAAACGGCTA ACCGCCACTA CGCACACGTC
GACTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGCGCAGC GCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCAGCAGAC GGCCCGATGC CGCAAACGCG TGAGCACATC
CTGCTGGCGC GTCAGGTTGG CGTTCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG CTGAACTGCT CGAGCTGGTC GAGATGGAAG TTCGCGAACT CCTGTCGAAG
TACGACTTCC CGGGCGACGA CACGCCGATC GTGAAGGGTT CGGCAAAGCT GGCGCTGGAA
GGCGACACGG GCGAGCTGGG CGAAGTGGCG ATCATGAGCC TGGCAGACGC ACTGGACACG
TACATCCCGA CGCCGGAGCG TGCAGTTGAC GGCGCGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGCCGCGG TACGGTGGTG ACGGGTCGTG TCGAGCGCGG CATCGTGAAG
GTCGGCGAAG AAATCGAAAT CGTCGGTATC AAGCCGACGG TGAAGACGAC CTGCACGGGC
GTTGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCAG GCGACAACGT CGGTATCCTG
CTGCGCGGCA CGAAGCGTGA AGACGTGGAG CGTGGCCAGG TTCTGGCGAA GCCGGGTTCG
ATCACGCCGC ACACGCACTT CACGGCTGAA GTGTACGTGC TGAGCAAGGA CGAAGGCGGC
CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGTAC GACGGACGTG
ACGGGCTCGA TCGAGCTGCC GAAGGACAAG GAAATGGTGA TGCCGGGCGA CAACGTGTCG
ATCACGGTGA AGCTGATCGC TCCGATCGCG ATGGAAGAAG GTCTGCGCTT CGCAATCCGC
GAAGGTGGCC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
 
Protein sequence
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLTKKF GGEAKAYDQI DAAPEEKARG 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI VKGSAKLALE
GDTGELGEVA IMSLADALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLAKPGS
ITPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPKDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE