Gene Bamb_0222 details

Gene Information

• Locus tag: Bamb_0222
• ID: 4309970
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 258079
• End bp: 258777
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638148001
• Product: ABC transporter related
• Protein accession: YP_772116
• Protein GI: 115350277
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGACG CCTCGCCTCC CCTCGTCGAG ATCAGCCACG TCGCGAAGTC GTACCGGCGC 
GGCAACCAGG TCGTGCCGGT GCTGACCGAC ATCACGCTCG ACATCGGCGA AGGCGACTTC 
GTCGCGCTGA TGGGGCCGTC GGGTTCCGGC AAGAGCACGC TGCTCAATCT CGTCGCCGGC 
ATCGACCGGC CCGACAGCGG CGAGCTGCGC GTGGGCGGCC TCGACATCTC GCGGCTCGAG 
GAGGCGCAAC TGGCCGAATG GCGCGCGGCG AACGTCGGCT TCATCTTCCA GTTCTACAAC 
CTGATGCCCG TGCTCACCGC GTTCGAGAAC GTCGAGCTGC CGCTGATGCT CACGCACCTG 
TCGCGCCGCG AACGGCGCGA ACGCGTCGAG CTGGTGCTCG ACATGGTGAA CCTCGGCGAC 
CGGACCAGTC ATTATCCGTC CGAGCTGTCG GGCGGCCAGC AGCAGCGCGT CGCGATCGCG 
CGCGCGCTGA TCACCGATCC GGTGCTGATC GTCGCCGACG AGCCGACCGG CGACCTCGAC 
CGCGCGTCGG CCAGCGACGT GCTCACGATG CTGCAACGGA TGAACGCCGA GCTCGGCAAG 
ACGATCATCA TGGTGACCCA CGATGCGCAC GCGGCCGGCG CCGCGCAGTC GCTCGTGCAT 
CTGGAAAAAG GGGAGCTGAT CGATGGGCAC GCCGTCTGA 

 

Protein sequence

MNDASPPLVE ISHVAKSYRR GNQVVPVLTD ITLDIGEGDF VALMGPSGSG KSTLLNLVAG 
IDRPDSGELR VGGLDISRLE EAQLAEWRAA NVGFIFQFYN LMPVLTAFEN VELPLMLTHL 
SRRERRERVE LVLDMVNLGD RTSHYPSELS GGQQQRVAIA RALITDPVLI VADEPTGDLD 
RASASDVLTM LQRMNAELGK TIIMVTHDAH AAGAAQSLVH LEKGELIDGH AV