Gene Bamb_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0220 
Symbol 
ID4309968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp255731 
End bp256897 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID638147999 
Producthypothetical protein 
Protein accessionYP_772114 
Protein GI115350275 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTC CGTTGACCTA CATCGCGCGC AACCTGTGGA CCCGGCGGCT CACCATCGCC 
CTCACCGCGG GCGGGATGGC GCTCGTGATC TTCGTGTTCG CGACGGTGCA GATGCTCGAC
GCCGGGCTCA CGAAGACACT CGTGTCGACC GGCGAACCCG ATAACGCCGT GGTGATCCGC
AAGGGCGCCG AAACCGAGAT CCAGAGTTCG ATCGACCACC AGCAGGCCAA CGCGCTCGAG
ATGCATCCGG CCGTCGCGCT CGGCCCTGAC GGCCGGCCGC GGGTGTCGAA GGAAGCCGTC
GTGCTGATCT CGCTCGTGAA GACGTCGAGC GGCAAGCCGT CGAACGTCGT GATCCGCGGC
GTGTCGCCGG CCGGCCTCGC GCTGCGGCCG CACGTGAAGC TCGTGGCCGG CCGCACGTTC
GCGCCGGGTT CGTCGGAGAT CGTCGTCGGC AGCGCGATCG CGAAAGGCTT CAGCGGCACG
CAGCTCGGCG ACAGCCTGCA TTTCGCGCAG CGCGACTGGA CCGTGGTCGG CGTGTTCGAC
GCCGGCGGCA GCGGCTTTGA TTCGGAGATC TGGGGCGACG TCGACCAGCT GATGCAGTCG
TTCCGGCGCA CGAGCTACTC GTCGATGGTG CTGCGCATCC CGAGCGCCGA CGGCTTCGCG
CGCTTCAAGG CCGACATCGA CGTCGACCCG CGGCTGACCG ACGAGGCGAA GCGCGAACAG
ACTTTCTACG GCGACCAGTC GAAGGCGCTG TCGCGGTTCA TCAACATTCT CGGCATCACG
CTGTCGACGA TCTTCTCGAT TGCCGCGATG ATCGGCGCGA TGATCACGAT GTACGCATCG
GTCGCGAACC GCACCGCCGA GATCGGCACG CTGCGCGCGC TCGGCTTCAA GCGCATGAAC
GTGCTCGCCG CGTTCCTGCT GGAAGCGCTG CTGCTCGGCT TCGTCGGCGG CGTCGCGGGG
CTCGCGTGCG CGTCGCTGAT GGAGTTCGCG TCGTTCTCGA CGACCAACTT CCAGACCTTC
GCCGACCTGT CGTTCCGCTT CGTGCTGACG CCCGCGATCG TCGTGAAGAC GCTGCTGTTC
TCGCTGGTGA TGGGCCTCGT CGGCGGGTTC CTGCCGGCGA TGCGCGCCGC GCGGCTGAAC
ATCGTCGACG CGCTGCGCGC GCGGTGA
 
Protein sequence
MAIPLTYIAR NLWTRRLTIA LTAGGMALVI FVFATVQMLD AGLTKTLVST GEPDNAVVIR 
KGAETEIQSS IDHQQANALE MHPAVALGPD GRPRVSKEAV VLISLVKTSS GKPSNVVIRG
VSPAGLALRP HVKLVAGRTF APGSSEIVVG SAIAKGFSGT QLGDSLHFAQ RDWTVVGVFD
AGGSGFDSEI WGDVDQLMQS FRRTSYSSMV LRIPSADGFA RFKADIDVDP RLTDEAKREQ
TFYGDQSKAL SRFINILGIT LSTIFSIAAM IGAMITMYAS VANRTAEIGT LRALGFKRMN
VLAAFLLEAL LLGFVGGVAG LACASLMEFA SFSTTNFQTF ADLSFRFVLT PAIVVKTLLF
SLVMGLVGGF LPAMRAARLN IVDALRAR