| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0219 |
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| Symbol | |
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| ID | 4309967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 254380 |
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| End bp | 255717 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638147998 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_772113 |
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| Protein GI | 115350274 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTAT TCGACCTGAA CCGGGGTGCG ATTGCCCCGG TCGCCGACGA AGTCGACGTC
GTCGGGCTGC GCGTGACCGG CACGATCCCG CCCGAACTCG ACGGCACGCT GCTGCGCAAC
GGCCCGAATC CGCCGGGCGG CCGCTTCGAC GGGAACGACA TACTGTCGTG GTGGCCGGAA
GCGGCGATGC TGCATGCGAT CGCATTCGAA AACGGCCGCG CGGCCGGCTA CCGGAACCGC
TGGGCGCGCA CGCGGCGCTG GGCCGCCGTG CATGCACCCG CGCAGGCACC GCACCTGCCC
GACACCAATC CGAACGTGAA CCTCCTGCAG CACGCGGGCG AATTGCTGGC GCTGGCCGAA
GGGGGCGCGC CGGTCGCGAT CACGGCCGCA CTCGACACGC TCGGCGCACC CGCGCGGCAC
GCGGCGCTCG ACGGCGCGAT GACCGCGCAT CCGAAGGTCG ATCCGGTGAC GGGCGAGCTG
ATCCTGTTTC GCGCGGACTG GCGCAAACCG TGGCTGCGCT ATGGCGTCGC GGACGCGCGC
GGCGTGCAGC GCGTCGACCT CGCCGTCGAC GTGCGCGCGC CGTCGATGAT GCACGACCTC
GCGATCACCG AAACCCGCAG CCTGCTGCTC GACCTGAATG TCGGCTACGA CTTCGCGATG
CTGAAGCAGG GGCACCGGAT GCCGCTGCGC TGGCACGACG ACCGCGACGC ACGGATCGGC
GTGATCCCGC GCCACGGCGG CGACGTGCGC TGGTTCGGCA TCGAGCCGTG CTTCATCCAG
CACGTCGTGA ACGCGTACGA CTGCGACGTG TCGTGCATCG TGCTCGACGT GGTTCGCTAT
CCATGGTTCC TGCGGCTCGA CGCGCGCACC GGTCGTTTTG CCGACAACCC GCTCGGCGAG
CTGTGGCGCT ACGTGATCGA TACCGCGAAC GGGCTGGTCG ACGAAGGGCC GCTCGCCGAC
GGCGGCATCG AGCTGCCGCG CATCAACGAA AGCAGGACGG GGCGCGGCTA CCGCTATCTG
TATGCGGTCG AGCAGCCGAA CAACGCGGAA ATGCGCGGCG TGATGCGCTT CGACCACGTG
CGCGGCACGA CGACGCGTTA CGCGGTGCCG GCCGGCGACC AGAACGGCGA ACCGGTGTTC
GTGCCGCGCC CGGGCGGTAC CGACGAAGAC GACGGCTGGC TGCTGGTGGT GGTCTACCGC
GCGGCGACGG ATACGAGCGA CGTCGTGATT CTCGATGCCC GCGCGATCGA TGCGGCGCCG
GTCGCGACGG TGCACCTGCC GCGTCGCGTG CCCGCCGGCT TCCACGGCGC GTGGGTGCCG
CGCGAGCGCC GGGCGTGA
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| Protein sequence | MTVFDLNRGA IAPVADEVDV VGLRVTGTIP PELDGTLLRN GPNPPGGRFD GNDILSWWPE
AAMLHAIAFE NGRAAGYRNR WARTRRWAAV HAPAQAPHLP DTNPNVNLLQ HAGELLALAE
GGAPVAITAA LDTLGAPARH AALDGAMTAH PKVDPVTGEL ILFRADWRKP WLRYGVADAR
GVQRVDLAVD VRAPSMMHDL AITETRSLLL DLNVGYDFAM LKQGHRMPLR WHDDRDARIG
VIPRHGGDVR WFGIEPCFIQ HVVNAYDCDV SCIVLDVVRY PWFLRLDART GRFADNPLGE
LWRYVIDTAN GLVDEGPLAD GGIELPRINE SRTGRGYRYL YAVEQPNNAE MRGVMRFDHV
RGTTTRYAVP AGDQNGEPVF VPRPGGTDED DGWLLVVVYR AATDTSDVVI LDARAIDAAP
VATVHLPRRV PAGFHGAWVP RERRA
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