| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0152 |
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| Symbol | |
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| ID | 4310894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 182051 |
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| End bp | 184537 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638147931 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_772047 |
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| Protein GI | 115350208 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA TCCAGCAGGC CCTGCAGGAG GCCCTCACGC ACCATCAGGC CGGACGTCTC
GGGGAAGCAA AGACGCTGTA CGACGCGATC CTGCACGCTC AGCCCGGGCA GCCGGACGCG
ATGCACTTCC TCGGGCTGCT CGCGTGCCAG CTGAAGCAGT ACGACGCGGG CCTCGCGTTG
ATGGAGCGCT CGCTCGCCGA GCGACCGGAC GCGTCGTATT TCAACAACCT CGGCAACATG
CTGCGCGAAT GCGGGCGGCT CGACGACGCG ATCGCGCACT ATCGTCGCGC GGTGGCGTTG
CGTCCCGACT ATCCGGAAGC GCACAACAAC CTCGGCAACG CGCTGCGCGA CGCGCGCGAT
CCGGCCGAGG CGATGCGGAG CTGTTCGCGC GCGATCGAAC TGCGCCCCGG CTACGCGGAG
GCATACAACA ACCTCGGCAA CGTGCTGCAG GACCTGGGCG AACTGGATGC GGCCGCGGCA
AGCTACGGCA AGGCGATCGC CTTCCATCCC GCGTACGCGG AAGCGCACAG CAACCTCGGC
AACGTGCTGC GCGCACAGGA GCGGCACGCG GACGCGATCG TCCACTACCG CCGCGCGATT
GAACTGAACC CTGCGCTGCG CGTCGCGCAT CGCGGGCTCG CCATTGCGCT GCGGGCGACC
GACGATTTCG ACGGCGCGCT CGAGCATGCG CGCGCGGGGC TCGAACCGGA CGATGCGGAA
GGCCATTGCA TGCTCGGGCG GTCGCTGCGC AGCATGAACG ACTTCGACGG CGCGGCGCGC
TTGTTCGAGC GCGCGTGCGA GATCGATCCC GGCTACGCGC CGGCATGGTG CCGGCTCGGC
GAGCTGCGTT GCCAGCAGGG CGAATACGAG GAATCCCTGC GCCTGTGCCG GCACGCGATC
GAACTCGATC CCGAACTCGC GGATGCGTAC AACTTCCTCG GTCTCGCGTA TCACAACCTC
GACCGGATGG CGGCGTCGGA GCTGAGCCAT CGCCACGCGA TCGACCTGAA TCCGGACGAC
GCGGACGCGC ACCACAATCT CGCGGCCGCG CTGTTCCGTC TCGACAAGCT CGACGAGGCG
ATGAGCGAAT ACCGGATCGC GCAGGAACTC GGCGTCGATC CGGTGAAGAT TCAGCTGACG
CTCGGCGACA TCCTGTGGGC CAAGCGCGAT TTCTCCGGTG CGGTCGCGGC GTTCCGCGAA
GCCGTCGAAC ACGATCCGCA TCGCGCTTAC GCGCGGCTGC TGTTCAACAT GTCGAGCTCG
CCGGCGTTCG CGCCCGAGGA GTGGGTCGTC GATGCGCAGC GCTACGGCGA CTACCTGGCG
CGCGACGCGC GGCTGCTGTC GCATGACCGC GAACAGCGTG CGCGGCAGGC GCGCGGCCGG
CCGTTGCGCG TCGGCTTCGT GTCCGGCGAC CTGCGTCAGC ATCCGGTCGG GATTTTCCTC
GAAAGCGTGC TCGCGCATCT CGATCGCACG CGCATCGAGC CGCATGCATA CGTGACCTTC
GTGGTGGAAG ACGACGTGAC CGCGCGGCTG AAAACGGGCT TCGCGAGCTG GAAGAAGCTC
ACGTGCCTGA ATCGCGACCA GGCCGCGCGG ATGATCCACG ACGACGGCAT CGACGTGCTC
GTCGATCTGG CCGGCCACAC CAACTGGAGC GGGCTGCCCG TGTTCGCGCA CCGGCCCGCG
CCGGTGCAGG CGAGCTGGCT CGGCTTCTTC GCGACGACCG GCTGCCGCGC GATCGACTAC
TTCATCGGCG ACCCGCATAC GCTGCCGGCC GACGAGGCGC ATCACTTCGT CGAGCAACCG
TGGCATTTGC CGGACAGCTA CCTGTGCTTC ACGCCGCCGG CTTACGACGT CGCGGTCGGC
CCGCTGCCGA TGGCCACGAA CGGTGGCGTG ACGTTCGGCT GCTTCGGCAA GCTCACGAAG
ATCAGCGACG ACGTGATCGC GCTGTGGTCG CGCCTGCTGC ACGCGCTGCC CGATGCGCGG
CTGATGCTGA AGGCGCACGA GCTCGGCGCG AGCGACCTGA ACCGCGCGAC GCTCGAGCGT
TTCGCGCGGC ACGGCATCGG CGCGCATCAG CTGATCCTCG AAGGCGGTTC GCCGCGCGCC
GAGTATTTCA ACGCGTACAA CCGGATCGAC ATCGCGCTGA GCCCGTTCCC GTATCCGGGC
GGCACGACGA CGGCCGAAGC GCTGTGGATG GGCGTGCCGG TGATCGGGAT GAAGGGCGGC
CGCTTCGTCA CGCATATCTG CGAAAGCCTG CTGCATGCGG CCGGGATGGG CGACTGGATC
GCCGCCGACG AGGACGCGTA TCTCGCGAAG GCGATCGCGT TCGCGGGCGA TCGCGACGCG
CTGGCGGCAT TGCGCGCGAC GCTGCGCGAA CGCACGCTCG CGTCGCCGCT GTGCGACGCG
GCGCGTTTCG CACGCAATCT CGAGGATGCG TTCCACGGGA TGTGGGCGCG CTACGTGGCC
GGCGACACGG ACGGCGCACG CACATGA
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| Protein sequence | MNDIQQALQE ALTHHQAGRL GEAKTLYDAI LHAQPGQPDA MHFLGLLACQ LKQYDAGLAL
MERSLAERPD ASYFNNLGNM LRECGRLDDA IAHYRRAVAL RPDYPEAHNN LGNALRDARD
PAEAMRSCSR AIELRPGYAE AYNNLGNVLQ DLGELDAAAA SYGKAIAFHP AYAEAHSNLG
NVLRAQERHA DAIVHYRRAI ELNPALRVAH RGLAIALRAT DDFDGALEHA RAGLEPDDAE
GHCMLGRSLR SMNDFDGAAR LFERACEIDP GYAPAWCRLG ELRCQQGEYE ESLRLCRHAI
ELDPELADAY NFLGLAYHNL DRMAASELSH RHAIDLNPDD ADAHHNLAAA LFRLDKLDEA
MSEYRIAQEL GVDPVKIQLT LGDILWAKRD FSGAVAAFRE AVEHDPHRAY ARLLFNMSSS
PAFAPEEWVV DAQRYGDYLA RDARLLSHDR EQRARQARGR PLRVGFVSGD LRQHPVGIFL
ESVLAHLDRT RIEPHAYVTF VVEDDVTARL KTGFASWKKL TCLNRDQAAR MIHDDGIDVL
VDLAGHTNWS GLPVFAHRPA PVQASWLGFF ATTGCRAIDY FIGDPHTLPA DEAHHFVEQP
WHLPDSYLCF TPPAYDVAVG PLPMATNGGV TFGCFGKLTK ISDDVIALWS RLLHALPDAR
LMLKAHELGA SDLNRATLER FARHGIGAHQ LILEGGSPRA EYFNAYNRID IALSPFPYPG
GTTTAEALWM GVPVIGMKGG RFVTHICESL LHAAGMGDWI AADEDAYLAK AIAFAGDRDA
LAALRATLRE RTLASPLCDA ARFARNLEDA FHGMWARYVA GDTDGART
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