Gene Bamb_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0135 
Symbol 
ID4309204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp159394 
End bp160446 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content70% 
IMG OID638147913 
Productoxidoreductase domain-containing protein 
Protein accessionYP_772030 
Protein GI115350191 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCAT TGCTCAGGAT TGGTTTGATG GGTTTCGGTT TCGCCGGCGC GACGTTCCAC 
GCGCCCGTGA TCGCCGCGAG CGGCCGCACG GAGGTCGCCG CGATCGCGAC GGGGCAGCCC
GATCGCGCAC GCGCCGCGTA TCCGGGCGCG CGCATCGTCC CCGATCTCGA TACGCTGCTC
GGCCTCGACG ATATCGACTG CGTGGTGATC GCCACGCCGA ACGACACCCA CTTCCCGCTC
GCGCGCCAGG TGCTCGAAGC CGGCCGTCAC GTCGTCGTCG ACAAGCCGGT CACGCTCACC
GCCGACGAGG CGCTCACGCT CGCGCGGCTC GCGAACGCGC GCAGCCGCCT GTTCGCGCCG
TTCCACAACC GCCGCTGGGA CGGCGACTTC CTCACCGTGC GCCGCATCGT CGAATCCGGC
GAACTCGGCC GGCTGACGTA TTTCGCGTCG CACTTCGACC GTTTCCGGCC GACCCCGCGC
ACGCGCTGGC GCGAGGAGCC CGCCCGCGGC GGCGGCCTGC TGCTCGACCT CGGCCCACAC
CTGATCGACC AGGCGCTCGC GCTGTTCGGG CTGCCCGACA CGGTCAGCGC GACGGTCAAG
ACGCGCCGCG ACAACGGCAC GGCGCCCGAT TTCGTGCACC TGCTGCTCGG CTATCCGGAC
AAGGACGTCG CGCTGCACGC GAGCGCGCTG TCGGCGATCG AGCCCGCGCG CTTCACGCTG
CACGGCACGT GCGGCAGCTA TCAGAAGTTC GGGCTCGATA CGCAGGAAGA CCAGTTGAAG
GCAGGCCTCA CGCCCGATCA CGTCGAGTTC GGCGGCGGCA ACCCGCCCGG CGTGCTGCGC
ACGCTCGAAG GCGAGGTCGA GGTCGAGCGG CCGGTGCCGA CGCTCGACGG CCAGTATGCG
GAGTTCTATC GCGCGCTCGC CGCGTCGGTC CACGACGGCG CACCGTTCCC GGTCACGCCG
CAGGACGCGG TCGACGTGAT GACGATCATC GAGCTTGCCG CGCAGAGCGA GCACGAAGGC
CGTCGGGTAC CATTCGTGCG CCGCATCGTC TGA
 
Protein sequence
MSSLLRIGLM GFGFAGATFH APVIAASGRT EVAAIATGQP DRARAAYPGA RIVPDLDTLL 
GLDDIDCVVI ATPNDTHFPL ARQVLEAGRH VVVDKPVTLT ADEALTLARL ANARSRLFAP
FHNRRWDGDF LTVRRIVESG ELGRLTYFAS HFDRFRPTPR TRWREEPARG GGLLLDLGPH
LIDQALALFG LPDTVSATVK TRRDNGTAPD FVHLLLGYPD KDVALHASAL SAIEPARFTL
HGTCGSYQKF GLDTQEDQLK AGLTPDHVEF GGGNPPGVLR TLEGEVEVER PVPTLDGQYA
EFYRALAASV HDGAPFPVTP QDAVDVMTII ELAAQSEHEG RRVPFVRRIV