| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0109 |
|---|
| Symbol | |
|---|
| ID | 4308583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 126501 |
|---|
| End bp | 127655 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638147887 |
|---|
| Product | putative aminotransferase |
|---|
| Protein accession | YP_772004 |
|---|
| Protein GI | 115350165 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGCG CCACCACGCC TCGTTCGAAA CTGCCGGACG TCGGGACGAC GATCTTCACG
GTGATCGGCC AGCTTGCCGC GCAGCACGAT GCGCTGAACC TGTCGCAGGG CGCGCCGAAT
TTCGCGCCCG ATCCGGCGCT CGTCGAGGGC GTCGCGCGCG CGATGCGCGA CGGCCACAAC
CAGTACGCGC CGATGGCCGG CCTCGCGTCG CTGCGCGAGC GGCTCGCGGA GAAGACCGAG
GCGCTGTACG GCACGCGCTA CGACCCGGGC ACCGAGATCA CGGTGATCGC GAGCGCGAGC
GAAGGGCTCT ACGCGGCGAT CAGCGCGCTC GTGCATCCGG GCGACGAAGT GATCTATTTC
GAGCCGTCGT TCGACAGCTA TGCGCCGATC GTGCGGATGC AGGGCGCGAC GCCGGTCGCG
ATCAAGCTGT CGTCCGGGCA TTTCCGCGTG AACTGGGACG AAGTGGCCGC GGCGATCACG
CCGCGCACGC GGATGATCAT CGTCAACACG CCGCACAACC CGACCGCGAC GGTGTTTTCC
GCCGACGATC TCGAACGGCT CGCGCAGCTC ACGCGCGATA CCGACATCGT GGTGTTGTCC
GACGAAGTCT ACGAGCACGT CGTGTTCGAC GGCGCGCAGC ACCAGAGCGT CGCGCGTCAT
CGCGCGCTGG CCGAGCGCAG CGTGATCGTG TCGTCGTTCG GCAAGTCGTT CCACGTGACG
GGCTGGCGGG TCGGTCATTG CCTCGCACCG GCCGAGCTGA TGGGCGAGAT CCGCAAGGTG
CACCAATTCA TGGTGTTCTC GGCCGATACG CCGATGCAGG TCGCGTTCGC GGAGATCCTC
GCGCGGCCCG ACAGCTATCT CGGCCTGTCG GCGTTCTACC AGGCCAAGCG CGACCTGCTC
GCGCGCGAGC TGGCCGATTC GCGCTTCGAG CTGCTGCCGA GCGAAGGCTC GTTCTTCATG
CTCGCGCGGT TCCGGCACTT CTCGGACGAG CGCGACAGCG ACTTCGTGCT GCGCCTGATC
CGCGATGCGC GCGTCGCGAC GATTCCGCTG TCGGCGTTCT ATGCCGACGG CACCGACGCG
GGCGTGATTC GCCTCAGTTT CTCGAAGGAC GACGCGACGC TGATCGAAGG CGCGCGGCGG
TTGCGGTCGC TGTAA
|
|---|
| Protein sequence | MRSATTPRSK LPDVGTTIFT VIGQLAAQHD ALNLSQGAPN FAPDPALVEG VARAMRDGHN
QYAPMAGLAS LRERLAEKTE ALYGTRYDPG TEITVIASAS EGLYAAISAL VHPGDEVIYF
EPSFDSYAPI VRMQGATPVA IKLSSGHFRV NWDEVAAAIT PRTRMIIVNT PHNPTATVFS
ADDLERLAQL TRDTDIVVLS DEVYEHVVFD GAQHQSVARH RALAERSVIV SSFGKSFHVT
GWRVGHCLAP AELMGEIRKV HQFMVFSADT PMQVAFAEIL ARPDSYLGLS AFYQAKRDLL
ARELADSRFE LLPSEGSFFM LARFRHFSDE RDSDFVLRLI RDARVATIPL SAFYADGTDA
GVIRLSFSKD DATLIEGARR LRSL
|
|---|
| |