Gene Bamb_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0106 
Symbol 
ID4311234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp122942 
End bp123793 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID638147884 
ProductLysR family transcriptional regulator 
Protein accessionYP_772001 
Protein GI115350162 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATA CCGTTTTGCT GCGCTCTTTC GTGGCCGTCG TCCAGGAAGG CGGGTTTACG 
CATGCCGCGG CCCGTCTGAA TCTGACGCAG TCCGCGGTCA GCGCGCATCT GCGGCGCCTG
GAAAAACAGA TCGGCCGTGA CCTGCTCGTG CGCACCACCC GCTCGGTCAC GCTCACAGTG
GACGGCGAAC TGCTGCTCGG TTACGCACGC GCCATCCTCG CGCTCAATCA GGATGCGCGG
GCGCAGCTGA TGCGCGAACC GAGCGCTGGC ACGATCCGCG TGGGTCTGTC GGAAGACCTC
GCCAATGTCA GGCTGATGCA TGTGATGCAG GCGTTTGCCG TGCGGTACCC GCGCATCGCA
TTCAGCATCA GGGTCGGCAT CCCGGGCGAA CTGCTCCAGG CGCTGGATCA CGGTGAACTG
GATGTGGTGA TGGGTGGACG CTGCCACGAC GGGCCCACCG GACGCGTGCT CTGGCGCGAG
CCGCTCGTGT GGGCCGGTGC GGATTGGGCG TCGCTCACGC CTGGCGCACC GGTGCCGATT
GCGCTGTTGC CGGAACCGTG CCCGTATCGT GAGGCCGCGC TGGCAGCACT GGCCCGCGCG
CGCGTGGATT ACCGGATCGT GCTCGTGTCC CCGAGCAGCG CCGGCCTGTG CGCCGCCGCG
CACGCGGGCT TTGCGGTGAC GCCGATCGTG CACACGCAAC TGGCGCACGG CTTGCGTGCG
ATCCCGCCGG ATGCCGGCCT GCCGGCCCTG CCCGATGTCG AGTTCACGAT GTTCGCGGCG
CCGGGCGCGT CGGCCCGGGT TGTCGATGAA CTGGGCAACG CGATCGTGCT GGCATTCGCG
CACAAAGGAT GA
 
Protein sequence
MFDTVLLRSF VAVVQEGGFT HAAARLNLTQ SAVSAHLRRL EKQIGRDLLV RTTRSVTLTV 
DGELLLGYAR AILALNQDAR AQLMREPSAG TIRVGLSEDL ANVRLMHVMQ AFAVRYPRIA
FSIRVGIPGE LLQALDHGEL DVVMGGRCHD GPTGRVLWRE PLVWAGADWA SLTPGAPVPI
ALLPEPCPYR EAALAALARA RVDYRIVLVS PSSAGLCAAA HAGFAVTPIV HTQLAHGLRA
IPPDAGLPAL PDVEFTMFAA PGASARVVDE LGNAIVLAFA HKG