Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0102 |
Symbol | |
ID | 4311230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 114210 |
End bp | 116471 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638147880 |
Product | primosome assembly protein PriA |
Protein accession | YP_771997 |
Protein GI | 115350158 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGATA CCTACCTGCG CGTCGCGCTC GACCACCCGC TTGCCACCCT GTTCGACTAC CGCTGCGACG TCCAGCCGGC GCCCGAGCCC GGCACGCTCG TCCAGGTGCC GTTCGGCAAG CGGCAGGTCG TCGGGCTCGT CTGCGAAGTG ACGACTCACA CCGACGTGCC GCCGTCGCGG TTGCGCGGGA TCGACGCCAT CTGTACCGAA CTGCCGCCGC TGGCGCCCGA CTGGCTCGCG CTCGTATCGT TCGCGGCCGA CTACTACCAG CGCGGCCGCG GCGAAGTCGC GCTGCCGGCG TTGCCGCAGG CGTTGCGCGA TGCGCAGCGC TGGGGGCGGC TGCTGGCGCC GGAGGTGCGC TACCGGCTGA GCGAAGCCGG CCGCGCCGCG CTTCCCGACG CACTGCCCGC GCGCGGGGCC GCGCTGCGAC GGCTCGCACA GGCGCTCGCC GACACCGATT CGCTGACGTT GCCCGACGTG CGCGCGTTGC ACCCGAAGGC GGCCGCCACG CTCGACGACT GGGCGGCGCG CGGCTGGGTC GCGATCGAGG AGATCGGCTG GGCCGATGCG CCTGTGCCCA AAGCTGTGGA TAACCTGTCG ACAACCAGTG GACGAGCTGT GCCGCCGGCG CTCACCGACC AGCAGGCCGA GGCGCTCGAC GCGATCCGCG CCGCGCAGGG TTTCGCGCCG TTCCTGCTGC ACGGCGTGAC GGGCAGCGGC AAGACCGAGG TCTATCTGCA TGCGCTTGCC GCGCTGCTCG ACGCGCGGCC CGACGCGCAG GCGCTCGTGC TCGTGCCCGA AATCAACCTG ACGCCACAGT TCGAGGCCGC GTTTCGCGCG CGCTTCGCGG GCACGCTCGC GGACGACGCG ATCGTCACGC TGCACAGCGG GCTCGCCGAG GGCGAACGTG CGCGCAACTG GCTCGCCGCG CACACGGGCC GCGCGCGGAT CGTGCTCGGC ACGCGGCTCG CGGTGCTCGC GTCGCTGCCG ACGCTCGCGC TGATCGTCGT CGACGAGGAG CACGAGCCCG CGTACAAGCA GCAGGAAGGG TTGCGCTATT CGGCGCGCGA TCTCGCGGTG TGGCGCGCGA AGCATCTCGG CATTCCGGTC GTGCTCGGCT CGGCGACGCC GTCGCTCGAA AGCTGGTGGC AGGCCGAGCA GGGGCGCTAT ACGCGGCTCA CGCTGTCGCG CCGCGCGGTG GCCGACGCGA CGCTGCCCAC CGTGCGGCTG ATCGATCTCG AAGAGGAGCG GCGGCGCGGG CGCGCGTCGC TGGGCGGGCT GTCGGGGCCG CTCGTCGCGG CGCTGAAGGC GCGGCTCGAG CGCGGCGAAC AGAGCCTCGT GTTCCTGAAC CGGCGCGGTT ACGCGCCGCA GCTCGCGTGC GACGCGTGCG GCTGGGTCGC CGGTTGCCCG CGCTGCAGCG CCTACGTCGT GCTGCACAAG CCCGAGCATG CGCTGCGCTG CCATCACTGC GGCTGGGAAG CGCGTATTCC GCGCTCGTGC CCGGAATGCG GGAACGTCGA CATCGCGCCG CTCGGGCGCG GCACGCAGCG CATCGAGGAG GCGCTTGCCG AGGCCGTGAC GGGCGCGCGG ATCCTGCGGA TCGACGCGGA CAGCACACGA CGCAAGGGCA GCGCGCAGGC GTTGTTCTCG GACGTGCACG CCGGTGAAGT CGACATCCTG GTCGGCACGC AGATGATCGC GAAGGGGCAC GACTTCCAGC GCGTGTCGCT CGTCGGCGTG CTCAATGCGG ACACCGCGCT GTTCTCGCAC GACTTCCGCG CGAGCGAGCG GCTGTTCGCG CAGCTGATGC AGGTGAGCGG TCGCGCCGGG CGCGCCGGGC TACCCGGCGA GGTGCTGGTG CAGACGCGTT ATCCGCGTCA CGCGCTGTAT CACGCGCTCG GCCGGCAGGA TTACGTCGGC TTCGCGAATT CGACGCTCGG CGAGCGCCGC GACGCGCACC TGCCGCCGTT CGTCTACCAG GCGCTGCTGC GCGCCGAAGG ACGCACGCTC GACGCGGCGC TCGCGTTCCT GCTGCAGGCC GCCGCCGCGC TGCCGGGGCT GCCAGGCGCC GATCGGGTGA CCGTATACGA CGCGGTGCCG ATGACGATCG TGAAGGTCGC GAACGTCCAC CGCGCGCAAC TGCTGCTCGA AAGCGCGTCG CGGGCGGCGC TGCAGCATGC GCTGCGGGCC TGGCTCCCCG AGCTGCGCGC GCTGAAGGGC GTCCATCGGT GGAACCTCGA GGTCGATCCG CTCGATATCT GA
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Protein sequence | MADTYLRVAL DHPLATLFDY RCDVQPAPEP GTLVQVPFGK RQVVGLVCEV TTHTDVPPSR LRGIDAICTE LPPLAPDWLA LVSFAADYYQ RGRGEVALPA LPQALRDAQR WGRLLAPEVR YRLSEAGRAA LPDALPARGA ALRRLAQALA DTDSLTLPDV RALHPKAAAT LDDWAARGWV AIEEIGWADA PVPKAVDNLS TTSGRAVPPA LTDQQAEALD AIRAAQGFAP FLLHGVTGSG KTEVYLHALA ALLDARPDAQ ALVLVPEINL TPQFEAAFRA RFAGTLADDA IVTLHSGLAE GERARNWLAA HTGRARIVLG TRLAVLASLP TLALIVVDEE HEPAYKQQEG LRYSARDLAV WRAKHLGIPV VLGSATPSLE SWWQAEQGRY TRLTLSRRAV ADATLPTVRL IDLEEERRRG RASLGGLSGP LVAALKARLE RGEQSLVFLN RRGYAPQLAC DACGWVAGCP RCSAYVVLHK PEHALRCHHC GWEARIPRSC PECGNVDIAP LGRGTQRIEE ALAEAVTGAR ILRIDADSTR RKGSAQALFS DVHAGEVDIL VGTQMIAKGH DFQRVSLVGV LNADTALFSH DFRASERLFA QLMQVSGRAG RAGLPGEVLV QTRYPRHALY HALGRQDYVG FANSTLGERR DAHLPPFVYQ ALLRAEGRTL DAALAFLLQA AAALPGLPGA DRVTVYDAVP MTIVKVANVH RAQLLLESAS RAALQHALRA WLPELRALKG VHRWNLEVDP LDI
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