Gene Bamb_0084 details

Gene Information

• Locus tag: Bamb_0084
• Symbol: gidA
• ID: 4308734
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 95245
• End bp: 97215
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638147862
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_771979
• Protein GI: 115350140
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTTTC CCACAGAATT TGACGTCATC GTTGTCGGTG GCGGGCACGC CGGCACGGAA 
GCCGCGTTGG CCTCGGCCCG TATGGGCGCG AAGACGCTGC TGCTGACCCA TAACATCGAA 
ACGCTCGGGC AGATGAGCTG CAATCCGTCG ATCGGCGGCA TTGGCAAGGG CCATCTGGTC 
AAGGAAGTCG ATGCGCTCGG CGGCGCGATG GCTGCCGCGA CGGACGAGAG CGGTATTCAG 
TTTCGGATCC TCAATTCGTC GAAGGGCCCG GCCGTGCGGG CGACGCGCGC ACAGGCCGAC 
CGTATCCTGT ACAAGGCTGC GATCCGCCAT CGGCTCGAGA ATCAGCCGAA CCTGTGGCTG 
TTCCAGCAGG CCGTGGACGA TCTGATGGTG GAAGGCGACC GCGTGGTCGG CGCCGTCACG 
CAGATCGGCA TCCGCTTCCG CGCGCGGGCG GTAGTGCTGA CAGCAGGTAC GTTCCTCGAC 
GGCAAGATCC ACGTCGGTCT GAACAACTAT ACGGGCGGTC GCGCGGGCGA TCCGGCGGCC 
GTGTCGTTGT CGGCGCGCCT GAAGGAGCTG AAGCTGCCGC AGGGCCGCCT GAAGACCGGT 
ACGCCGCCGC GTATCGATGG CCGCTCGATC GACTTTTCGA AGCTGGACGA GCAGCCGGGC 
GACCTTGATC CGATTCCCGT GTTCTCGTTC CTGGGCCGCG CGGAACAGCA TCCGCAGCAG 
CTGCCGTGCT GGGTCACGCA TACGAACGAG CGCACGCACG ACATCATTCG CGGCGGCCTC 
GACCGTTCGC CTATGTATAC AGGCGTGATC GAAGGCGTCG GCCCGCGCTA CTGCCCGTCG 
ATCGAGGACA AGATTCACCG GTTCGCGTCG AAGGAATCGC ACCAGATCTT CCTGGAGCCG 
GAAGGGCTGA CGACCAACGA GTTCTACCCG AACGGAATTT CGACGAGCCT GCCGTTCGAT 
GTGCAGCTCG AGCTCGTGCA CTCGATGCGC GGCCTCGAGA ACGCGCACAT CCTGCGGCCC 
GGCTACGCGA TCGAGTACGA CTACTTCGAC CCGCGCGCGC TGAAGGCGTC GCTCGAAACG 
AAGGCGATCA ACGGGCTGTT CTTTGCGGGC CAGATCAACG GCACGACCGG CTACGAAGAA 
GCGGCCGCAC AAGGCCTGCT GGCCGGCTTG AACGCAGGCC GCTACGTGCA GGAGAAGGAC 
GCATGGTGCC CGCGTCGCGA TCAGGCGTAC CTGGGCGTGC TGGTCGACGA CCTCGTTACG 
CGCGGCGTGG CCGAGCCGTA CCGGATGTTC ACGAGCCGTG CGGAATACCG CTTGAGCCTG 
CGTGAAGACA ACGCGGACAT GCGTTTGACC GAGATCGGCC GCGAACTGGG GCTCGTCGAC 
GACGCACGCT GGGATGCATT CAGCCGGAAG CGCGACGCTG TTTCACGTGA AACCGAACGC 
CTGAAGTCGA CGTGGGTCAC GCCGAAGACG CTGCCGCCGG AAGAGGCGAC GGCTTTGCTC 
GGGAAGGCGA TCGATCACGA ATATAGCCTC GCCGAGCTGC TGCGCCGCCC GGGCATCAGC 
TACGACGGCG TGTGCAGCCT GAAGGGTGGC GAATGCGCGC CTACCGAACC GCTGGCCGAC 
GATCCGGTGC TGCTCGAGCA GATCAAGGAG CAGGTCGAGA TTGGCATCAA GTATCAGGGC 
TATATCGAGC GGCAGGCGAG CGAGATCGAG CGCAACGATG CGAACGAGAA CACGCGCTTG 
CCGGATGGCA TCGACTACCG CGAGGTTCGC GGCCTGTCGT TCGAAGTGAG CCAGAAGCTC 
AACGAGTTCC GGCCGGAAAC GATCGGCCAG GCCTCGCGGA TCTCGGGCGT CACGCCGGCT 
GCGATCTCAT TGCTGATGGT GCATCTGAAA CGCCGTGGCC TTGGCCGTCG TAACGGCACC 
GCCGCAGAGG CGACGGAGCA GGGGGATGGC ACCGTCCCGA CGCAACAATG A 

 

Protein sequence

MLFPTEFDVI VVGGGHAGTE AALASARMGA KTLLLTHNIE TLGQMSCNPS IGGIGKGHLV 
KEVDALGGAM AAATDESGIQ FRILNSSKGP AVRATRAQAD RILYKAAIRH RLENQPNLWL 
FQQAVDDLMV EGDRVVGAVT QIGIRFRARA VVLTAGTFLD GKIHVGLNNY TGGRAGDPAA 
VSLSARLKEL KLPQGRLKTG TPPRIDGRSI DFSKLDEQPG DLDPIPVFSF LGRAEQHPQQ 
LPCWVTHTNE RTHDIIRGGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS KESHQIFLEP 
EGLTTNEFYP NGISTSLPFD VQLELVHSMR GLENAHILRP GYAIEYDYFD PRALKASLET 
KAINGLFFAG QINGTTGYEE AAAQGLLAGL NAGRYVQEKD AWCPRRDQAY LGVLVDDLVT 
RGVAEPYRMF TSRAEYRLSL REDNADMRLT EIGRELGLVD DARWDAFSRK RDAVSRETER 
LKSTWVTPKT LPPEEATALL GKAIDHEYSL AELLRRPGIS YDGVCSLKGG ECAPTEPLAD 
DPVLLEQIKE QVEIGIKYQG YIERQASEIE RNDANENTRL PDGIDYREVR GLSFEVSQKL 
NEFRPETIGQ ASRISGVTPA AISLLMVHLK RRGLGRRNGT AAEATEQGDG TVPTQQ