| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0080 |
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| Symbol | |
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| ID | 4308730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 89778 |
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| End bp | 90935 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638147858 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_771975 |
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| Protein GI | 115350136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.217295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA ATCGATGGAT GGAGGCTCTG CTTGCCGCGG GCCTCGTGTG TGCGGCGGCC
ACGGCGTCGG CACAGGTGAA GATCGGCGTG ACGCTGTCGG CCACCGGGCC GGCCGCATCG
CTCGGGATTC CGGAAAAGAA CACGATCGCG CTGCTGCCGA AGGAAATCGC GGGCAAGAGC
GTCCAGTACA TCGTCCTCGA CGATGCGTCC GACACGAGCC GCGCGGTGCA GAACGTGCGC
AAGCTGATCG ACGAGGATCA CGTCGACGCG ATCATCGGTT CGTCCGTCAC GCCGAATTCG
CTCGCGATGC TCGATCCGGT GTCGCAGGGC AAGACACCGA CGATCTCGCT CGCGGCGAGC
GCGCAGATCA TCGCGCCGAT GGACGCGAAG CGCGCGTGGA TGTTCAAGGT GCCGCAGAAC
GACCAGCTGA TGGCCGATGC GATCGCCGGC TACATGGCGA AGCACGGCGT GAAGACGATC
GGCTTCATCG GCTTCGCCGA CGCGTACGGC GACAGCTGGT ACAACACGTT CAACGCGGCC
GCGGCGAAGA ACGGGTTGAA GGTCGTGTCG AACGAGCGCT ACAACCGCAC CGACGCGTCG
GTGATGGGGC AGGTGCTGAA GCTGCTGGGC TCGAATCCCG ACGCGGTGCT GATCGCCGGT
TCCGGCACGC CGGCCGCGCT GCCGGCCAAG ACGCTCAAGG AGCGCGGCTA CAAGGGCAAG
GTGTACCAGA CGCACGGCGT CGCGAACAAC GACTTCCTGC GCGTGTGCGG CAAGGATTGC
GAAGGCGAGA TCCTGCCGGC CGGCCCGGTG CTCGTGACCG ACCAGCTGCC CGATTCGAAT
CCGGTGAAGA AGCCGGCACT CGGCTACAAG GCTGCGTACG AGAAGGCATA CGGCGCGGGC
TCGCTGTCGA CCTTCGGCGG GCATGCGTGG GATGCGGGGC TGCTGCTGCA GCGCGCGATT
CCCGACGCGC TGAAGAAGGG CCAGCCGGGC ACCGAGGCGT TCCGCGAGGC GCTGCGCGCG
TCGCTCGAGA GCGTGAAGGA CCTGCCCGTG TCGCACGGCG TGATCAACAT GACGTCGACC
GACCACAACG GCTTGGACAC GCGTGCGCGC GTGATGGTGC AGATCGTCGA CGGCAAGTGG
AAGCTGCAGG CCGAGTAA
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| Protein sequence | MKMNRWMEAL LAAGLVCAAA TASAQVKIGV TLSATGPAAS LGIPEKNTIA LLPKEIAGKS
VQYIVLDDAS DTSRAVQNVR KLIDEDHVDA IIGSSVTPNS LAMLDPVSQG KTPTISLAAS
AQIIAPMDAK RAWMFKVPQN DQLMADAIAG YMAKHGVKTI GFIGFADAYG DSWYNTFNAA
AAKNGLKVVS NERYNRTDAS VMGQVLKLLG SNPDAVLIAG SGTPAALPAK TLKERGYKGK
VYQTHGVANN DFLRVCGKDC EGEILPAGPV LVTDQLPDSN PVKKPALGYK AAYEKAYGAG
SLSTFGGHAW DAGLLLQRAI PDALKKGQPG TEAFREALRA SLESVKDLPV SHGVINMTST
DHNGLDTRAR VMVQIVDGKW KLQAE
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