Gene Bamb_0064 details

Gene Information

• Locus tag: Bamb_0064
• ID: 4309256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 74549
• End bp: 75085
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638147842
• Product: nuclear protein SET
• Protein accession: YP_771959
• Protein GI: 115350120
• COG category: [R] General function prediction only
• COG ID: [COG2940] Proteins containing SET domain

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCAC GCAGGATCGC GGTGCGCCGC TCGGGAGTAC ACGGCAAGGG CGTGTTCGCG 
GTGGCGCCGA TCAAGGCCGG CGAGCGCGTA GTGGAATACA AGGGCGAGCG GATTTCATGG 
AAGGAAGCGC TGCGTCGGCA TCCGCACGAC CCGAGCGAGC CCAACCATAC GTTCTACTTC 
GCACTGGAAG AAGGCGGAGT GATCGACGGC AAGATCGACG GCAACAGCGC GCGCTGGATC 
AACCATTCGT GCGCGCCGAA CTGCGAGGCC GAGGAGACGA AGGGTCGCGT GTTCATCCAC 
GCGCTGCGCG ACATCGAGCC GGAAGAAGAG CTGTTCTACG ACTATGGCCT CGTGATCGAC 
GAGAAGCTGA CGAAGAAGCT CAAGCGCGAG TACGCGTGCC ATTGCGGCGC GGACGCATGC 
CGCGGCACGC TGCTCGCCAC ACCGGACGAC GACGGCAAGA AGAGGAAGAA GAAAGACAAG 
AAGGACAAGG ACGGCAAGTC CGAGTCCGCC GCGAAGGACA AGAAAAAGAA GAAGTGA 

 

Protein sequence

MSSRRIAVRR SGVHGKGVFA VAPIKAGERV VEYKGERISW KEALRRHPHD PSEPNHTFYF 
ALEEGGVIDG KIDGNSARWI NHSCAPNCEA EETKGRVFIH ALRDIEPEEE LFYDYGLVID 
EKLTKKLKRE YACHCGADAC RGTLLATPDD DGKKRKKKDK KDKDGKSESA AKDKKKKK