| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0059 |
|---|
| Symbol | |
|---|
| ID | 4309251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 70044 |
|---|
| End bp | 71159 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638147837 |
|---|
| Product | carboxylate-amine ligase |
|---|
| Protein accession | YP_771954 |
|---|
| Protein GI | 115350115 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2170] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCG AAACCTTCGT CAATTCCGAA CCGTTCACGT TCGGCGTCGA ACTGGAGATC
CAGGTCGTCA ACACGCACAA CTACGACCTG ACCAAGGCTG CATCCGACCT GATGCGCCTG
ATCCAGGGCG AGACCTTCCC CGGCAACATC ACGCCGGAAA TCACCGAGAG CATGATCGAG
CTGTCGACCG GCATCTGCCA CTCGCACGAG CAGGCAGTGT CCGAGCTCCA TGCGATCCGC
GACGTGCTCG TAAAGGCGGC CGACCAGCTC AACGTCGGGC TGTGCGGCGG CGGCACGCAC
GCGTTCCAGC AGTGGAGCGA CCGGCAGATC TACGACGCGC CGCGTTTCCA GTACATCTCC
GAGCTGTACG GCTATCTCGC GAAGCAGTTC ACCGTGTTCG GCCAGCACGT GCACATCGGC
TGTCCCGATC CGGACAGCGC GCTGTTCCTG CTGCACTCGA TGTCGCGCTT CATTCCGCAC
TTCATCGCGC TGTCCGCGTC GTCGCCGTTC GTGCAGAACG TCGACACCGG CTTCCATTCG
GCACGCCTGA ATTCGGTGTT CGCGTTCCCG CTGTCGGGCC GCGCGCCGTT CGTGCTGACC
TGGGACAGCT TCGAGGAGTA CTTCACGAAG ATGGTCAACA CGGGCGTCGT CAACTCGATG
AAGGACTTCT ACTGGGACAT CCGGCCGAAG CCCGGCTACG GGACGATCGA GGTGCGCGTG
ATGGACACGC CGCTGTCGGT CGATCGCGCG GCCGCGATCG CGTGCTACAT CCAGACGCTC
GCGCGCTACC TGCTGACCGA CCGGCCGCTG AAGCTCTCGG AGGACGACTA TCTCGTCTAC
ACGTTCAACC GTTTCGAAGC GTGCCGCTTC GGGCTCGAGG GCACCTGCGT CAATCCTCAG
ACAGGTGAGC GCCGCACGAT CGCGGAAGAC ATCCTCGACA CGCTTGACCG GATCGCGCCG
CATGCGGCCG CGCTCGGCTC GCGCGCGGCG CTCGACGAGA TCGGCGCGCT CGCGAAGGCG
CGCGTGAATG ACGCATCGTG GTTGAGAACC GTTTTCAAGC AGGAAAAATC GCTGAACGAG
ACGGTTCGCC AGCAGTGCCT GCGCTGGCGC GAATGA
|
|---|
| Protein sequence | MALETFVNSE PFTFGVELEI QVVNTHNYDL TKAASDLMRL IQGETFPGNI TPEITESMIE
LSTGICHSHE QAVSELHAIR DVLVKAADQL NVGLCGGGTH AFQQWSDRQI YDAPRFQYIS
ELYGYLAKQF TVFGQHVHIG CPDPDSALFL LHSMSRFIPH FIALSASSPF VQNVDTGFHS
ARLNSVFAFP LSGRAPFVLT WDSFEEYFTK MVNTGVVNSM KDFYWDIRPK PGYGTIEVRV
MDTPLSVDRA AAIACYIQTL ARYLLTDRPL KLSEDDYLVY TFNRFEACRF GLEGTCVNPQ
TGERRTIAED ILDTLDRIAP HAAALGSRAA LDEIGALAKA RVNDASWLRT VFKQEKSLNE
TVRQQCLRWR E
|
|---|
| |