| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0047 |
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| Symbol | |
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| ID | 4308715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 56333 |
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| End bp | 56881 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638147825 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_771942 |
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| Protein GI | 115350103 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.909533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCC TTCGCACGCC CCTGCGCTCC GCTCGCGCTC GCCGCGCTGC CCGCGACCGC
CGCGTGCGTC GCGGCGCGGC CGTGACCGCG GCACGCACGC GTGCACGCGG CTTCACGCTG
CTCGAGATGC TGGTCGTGCT CGTGATCGCG GGCCTGCTGG TGTCGCTCGC GTCGCTGTCG
CTCACGCGCA ATCCGCGCAC CGACCTGCGC GAGGAAGCGC AGCGCATCGC GCTGCTGTTC
GAGACGGCGG GCGACGAAGC GCAGGTGCGC GCGCGCCCGA TCGCGTGGCA GCCGACCGCG
CACGGCTTTC GTTTCGACGT GAGTTCGCCC GACGGCTGGC GCACGCTGCG TGACGACCTG
CTGCGCCCGC GCGACTGGGA CGGTGGCGTC ACGGGCGCCG AAATCGATTA TCCGGGGTCG
GACACGCACG CGAGCACCGT GGTGTTCGGC ACCGAAAGCG TCGACATGCC GGTGCGCGTG
ACGCTGCATT CGGCGGTCGG CAGCGCGACG ATCGTCGGCA CCGGCAACGG CCGGTACGAG
GTGCAATGA
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| Protein sequence | MPALRTPLRS ARARRAARDR RVRRGAAVTA ARTRARGFTL LEMLVVLVIA GLLVSLASLS
LTRNPRTDLR EEAQRIALLF ETAGDEAQVR ARPIAWQPTA HGFRFDVSSP DGWRTLRDDL
LRPRDWDGGV TGAEIDYPGS DTHASTVVFG TESVDMPVRV TLHSAVGSAT IVGTGNGRYE
VQ
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