| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0035 |
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| Symbol | |
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| ID | 4309662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 45249 |
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| End bp | 45725 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638147813 |
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| Product | LrgA family protein |
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| Protein accession | YP_771930 |
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| Protein GI | 115350091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.204482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACC CGACTACCAC TGCCGCCGCC CGCCCCGCCG CCGCGGGCAA CGTTGCGCGC
ACGGGCCGGA TCGTGCTGCA GGCCGCCGCG CTCGGCGTGC TGTGGATGGC GGTCGACTGG
GCCGTGCGCG CGGTCGGTCT GCCGGTGCCG TCCGGCGTGA TCGGCCTCGC GGTGCTGCTC
GTGCTGCTGT TCTCGGGCCG CGTCGCGCCC GCCTGGGTCA AGGACGGCGC GAACTGGCTG
CTGTCCGACA TGCTGCTGTT CTTCGTGCCG GCCGCCGTCG CGGCGGTCCA GTACGGCGGG
CTGTTCCGCG AGGACGGCTG GCGCATCGCG CTGGTCATGC TCGCCGGCAC CGCGTTCGTG
ATGGTCGCGG TGGCCGTCGC CGTCGACCTC GCCGCGAAGC TCGAACGCCG GCTGGCCGCG
CAGCGCGTGT TCGCCCAACG CCGCCGCGCG CGCCTCGCCA CCGTGTCCGC CCACTGA
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| Protein sequence | MTHPTTTAAA RPAAAGNVAR TGRIVLQAAA LGVLWMAVDW AVRAVGLPVP SGVIGLAVLL
VLLFSGRVAP AWVKDGANWL LSDMLLFFVP AAVAAVQYGG LFREDGWRIA LVMLAGTAFV
MVAVAVAVDL AAKLERRLAA QRVFAQRRRA RLATVSAH
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