Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0027 |
Symbol | |
ID | 4309654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 39843 |
End bp | 40625 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638147805 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_771922 |
Protein GI | 115350083 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCGG TTACCTACGC GCAGCTCAAC GGCTGGCTGA CCGCCTTCCT GTGGCCGTTC GTGCGGATGC TCGCGCTCGT CGCGACGGCG CCCGTGGTCG GCCATGCGGC GGTGCCGGTG CGCGTGAAGA TCGGCATCGC CGCGTTCATG GCGCTGGTCG TCGCGCCCAC GCTCGGCGCG ATGCCGGACG TCACCGTGTT CTCCGCGCCG GGCATCTGGA TCGTCGTCAC GCAGTTCCTG ATCGGCATCG CGCTGGGCTT CACGATGCAG CTCGTGTTCG CGGCCGTCGA GGCGGCCGGC GACTTCATCG GGCTGTCGAT GGGGCTCGGC TTCGCGACCT TCTTCGACCC GCATTCGAAC GGCGCGACGC CGGTGATGGG CCGCTTCCTG AACGCGATCG CGATGCTCGC GTTCCTCGCG GTGGACGGCC ACCTGCAGGT GTTCGCGGCG CTGGCCGCGT CGTTCCAGAC GCTGCCGGTG TCGGGCGACC TGCTGCACGC GCCCGGCTGG CGCACGCTCG CCGCGTTCGG CGCGACGGTG TTCGAGATGG GGCTACTGCT CGCGCTGCCG GTGGTCGCGG CCCTGCTGAT CGCGAACCTC GCGCTCGGGA TCCTGAACCG CGCGGCGCCG CAGATCGGCA TCTTCCAGAT CGGCTTTCCG GTCACGATGC TGGTCGGGCT GTTGCTCGTG CAACTGATGA TCCCGAACCT CGTGCCGTTC GTGTCGCACC TGTTCGACAT GGGGCTCGAT GCGATGGGGC GGGTGTTGCT GGGGTGGCGC TAG
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Protein sequence | MFSVTYAQLN GWLTAFLWPF VRMLALVATA PVVGHAAVPV RVKIGIAAFM ALVVAPTLGA MPDVTVFSAP GIWIVVTQFL IGIALGFTMQ LVFAAVEAAG DFIGLSMGLG FATFFDPHSN GATPVMGRFL NAIAMLAFLA VDGHLQVFAA LAASFQTLPV SGDLLHAPGW RTLAAFGATV FEMGLLLALP VVAALLIANL ALGILNRAAP QIGIFQIGFP VTMLVGLLLV QLMIPNLVPF VSHLFDMGLD AMGRVLLGWR
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