Gene Bamb_6635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6635 
Symbol 
ID4308469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008385 
Strand
Start bp42600 
End bp43562 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID638147774 
Productconjugal transfer ATPase TrbB 
Protein accessionYP_771712 
Protein GI115345527 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID[TIGR02782] P-type conjugative transfer ATPase TrbB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.277e-14 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC AGAAACCAGA ACACAACAGC ATCAAGGAAC GGGCGAAGAA GAAGCTCGAA 
CGCGACATGG GGCCGGAGCT GCTGGCCGCC CTCAACGATC CCAAGACCGT TGAAATCATG
CTCAACGCGG ACGGCAAGCT CTGGCTCGAA CGCCTGGGCG AGCCGATGAA GTGCATCGGC
ACGCTGCGCG TCGCGCAGGC GCAAGCCATC ATCGAAACCA TCGCGGGCTA CCACGGCAAG
GAAGTCACGC GCTCCAAGCC GATCCTGGAA GGCGAGCTGC CCCTTGATGG CAGTCGCTTC
GCCGGCCAGC TCCCGCCGGT TGTGCCCGCA CCCACCTTCG CCATTCGGAA GAAGGCCGTC
GCCATCTTCA CGCTCGATCA GTACGTCGAA CGCGGAATCA TGACCGCGCC GCAGCGCGAG
GCATTGATTG CAGCGGTGCG CGCGCACCGG AACATCCTTG TGATCGGCGG CACCGGCTCG
GGCAAGACCA CGCTGGTGAA CGCGATCATC AACGAGATGG TGATTCAAGA CCCGACCGAG
CGGGTTTTCA TCATCGAGGA CACCGGCGAA ATCCAGTGCG CCGCCGAGAA CTACGTCCAG
TACCACACCA GCATCGACGT GAACATGACG GCGCTGCTGA AAACCACCCT CCGCATGCGC
CCCGACCGAA TCCTGGTCGG CGAGGTGCGC GGCCCCGAAG CCCTTGATCT GTTGATGGCC
TGGAACACCG GGCACGAAGG AGGTGCTGCA ACCCTGCACG CAAACAACGC CAAAGCTGGA
TTGGATCGGC TCGCCATGCT CATCAGCATG CACCCCGATT CCCCGAAACC CATTGAACCG
CTTATCGGCG AGGCGGTTCA CGTGGTTGTT CATATCGCCC GCGTCGAAGG CTCGCGGCGC
ATCCAGGAAA TCTTGGAGGT TTCCGGGTTC GCCAACGGCC AGTACATCAC CAAAACCCTC
TGA
 
Protein sequence
MTDQKPEHNS IKERAKKKLE RDMGPELLAA LNDPKTVEIM LNADGKLWLE RLGEPMKCIG 
TLRVAQAQAI IETIAGYHGK EVTRSKPILE GELPLDGSRF AGQLPPVVPA PTFAIRKKAV
AIFTLDQYVE RGIMTAPQRE ALIAAVRAHR NILVIGGTGS GKTTLVNAII NEMVIQDPTE
RVFIIEDTGE IQCAAENYVQ YHTSIDVNMT ALLKTTLRMR PDRILVGEVR GPEALDLLMA
WNTGHEGGAA TLHANNAKAG LDRLAMLISM HPDSPKPIEP LIGEAVHVVV HIARVEGSRR
IQEILEVSGF ANGQYITKTL