| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6612 |
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| Symbol | |
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| ID | 4308484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008385 |
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| Strand | + |
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| Start bp | 17502 |
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| End bp | 19415 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638147751 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_771689 |
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| Protein GI | 115345504 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCA AGATGAACAA CGCGGTAGGG CCGCAAGTCC GAACCGCCAA ACCGAAGCCG
AGCAAGCTGC TGCCGGTGCT GGGCGCGGCC TCGATGGTCG GCGGCCTCCA GGCCGCGACG
CAGTTCTTCG CCCACACGTT CGCCTATCAC GCGACCCTCG GCCCCAACGT GGGCCACGTG
TACGCGCCCT GGTCGATCCT GCACTGGACG TACAAGTGGT ACAGCCAGTA CCCGGACGAG
ATCATGAAGG CCGGCAGCAT GGGGATGCTG GTTTCGACCG TGGGCCTGCT GGGCGTGGCC
GTGGCGAAGG TCGTCACGTC CAACAGCTCG AAGGCGAGCG AGTACCTGCA CGGCTCGGCC
CGCTGGGCCG AGAAGAAGGA CATTCAGGCG GCCGGCCTGC TGCCACGCGA GCGCAACGTC
CTGGAGATCG TCACCGGCAA GGCCGCACCC ACGGCTACCG GCGTGTACGT GGGCGGCTGG
CAGGACAAGG ACGGCAATTT CTTCTACCTG CGGCACAGCG GCCCCGAGCA CGTGCTGACC
TACGCGCCCA CGCGCTCGGG CAAGGGCGTC GGCCTGGTGG TGCCCACGCT GCTGTCGTGG
GGCGCGAGCA GCGTCATCAC CGACTTGAAG GGCGAGTTGT GGGCCTTGAC CGCCGGCTGG
CGGCAGAAGC ACGCCAAGAA CAAGGTGCTG CGCTTCGAGC CGGCCAGCAC CTCGGGCGGC
GTCTGCTGGA ATCCGCTGGA CGAAATCCGC CTCGGCACCG AATACGAGGT GGGTGACGTG
CAGAACCTTG CCACGCTGAT CGTTGACCCG GACGGCAAGG GCCTGGACTC GCACTGGCAG
AAGACCGCCT TCGCGCTCCT GGTCGGCGTG ATCCTGCACG CGCTGTACAA GGCCAAGGAC
GATGGCGGCA CCGCCACGCT GCCGTCCGTC GATGCGATGC TGGCCGACCC GAACCGGGAC
ATTGGCGAGC TTTGGATGGA AATGGCGACC TACGGGCACG TAGACGGCCA GAACCATCAC
GCCATCGGCT CGGCGGCCCG CGACATGATG GATCGGCCCG AGGAAGAAGC CGGATCGGTG
CTGTCCACGG CCAAGTCGTA CCTGGCCCTG TACCGCGACC CCGTGGTGGC CCGCAACGTC
AGCCGGTCGG ACTTCCGCAT CAAGCAGTTG ATGCACGAGG ACGACCCGGT AAGCCTCTAC
ATCGTCACCC AGCCCAACGA TAAGGCCCGC CTGCGGCCGC TGGTGCGCGT CATGGTGAAC
ATGATCGTGC GCCTGCTGGC CGACAAGATG GACTTCGAGG GCGGCCGGCC GGTGGCGCAC
TACAAGCACC GGCTCTTGAT GATGCTGGAC GAGTTCCCGA GCCTCGGGAA GCTGGAGATC
ATGCAAGAGT CGCTGGCCTT CGTGGCCGGC TACGGCATCA AGTGCTACCT CATCTGCCAG
GACATTAACC AGCTCAAGAG CCGCGAGACG GGCTACGGCC ACGACGAAAG CATCACGTCG
AACTGCCACG TGCAGAACGC CTACCCGCCC AACCGCGTCG AGACGGCCGA ACACCTGTCC
CGCCTCACCG GGCAGACCAC CGTGGTGAAG GAGCAGATCA CGACCAGCGG CCGCCGCACG
GCGGCGATGC TGGGCCAGGT GTCGCGCACT TACCAGGAAG TGCAGCGGCC CTTGCTGACG
CCCGACGAAT GCCTGCGCAT GCCGGGGCCA AAGAAGAACG CCCAGGGCGA GATCGAAGAA
GCCGGCGACA TGGTGATCTA CGTCGCGGGC TACCCGGCGA TCTACGGCAA GCAACCCCTG
TACTTCAAAG ACCCAGTGTT CTCGGCACGC GCCGCGATCC CTGCGCCCAA GGTCAGCGAC
CGCCTGCGCG CCGTCGCACA GGCCGAGACG GAAGGGGAGG GCATCACGAT ATGA
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| Protein sequence | MKIKMNNAVG PQVRTAKPKP SKLLPVLGAA SMVGGLQAAT QFFAHTFAYH ATLGPNVGHV
YAPWSILHWT YKWYSQYPDE IMKAGSMGML VSTVGLLGVA VAKVVTSNSS KASEYLHGSA
RWAEKKDIQA AGLLPRERNV LEIVTGKAAP TATGVYVGGW QDKDGNFFYL RHSGPEHVLT
YAPTRSGKGV GLVVPTLLSW GASSVITDLK GELWALTAGW RQKHAKNKVL RFEPASTSGG
VCWNPLDEIR LGTEYEVGDV QNLATLIVDP DGKGLDSHWQ KTAFALLVGV ILHALYKAKD
DGGTATLPSV DAMLADPNRD IGELWMEMAT YGHVDGQNHH AIGSAARDMM DRPEEEAGSV
LSTAKSYLAL YRDPVVARNV SRSDFRIKQL MHEDDPVSLY IVTQPNDKAR LRPLVRVMVN
MIVRLLADKM DFEGGRPVAH YKHRLLMMLD EFPSLGKLEI MQESLAFVAG YGIKCYLICQ
DINQLKSRET GYGHDESITS NCHVQNAYPP NRVETAEHLS RLTGQTTVVK EQITTSGRRT
AAMLGQVSRT YQEVQRPLLT PDECLRMPGP KKNAQGEIEE AGDMVIYVAG YPAIYGKQPL
YFKDPVFSAR AAIPAPKVSD RLRAVAQAET EGEGITI
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