Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2970 |
Symbol | rho |
ID | 4286866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 3252472 |
End bp | 3253782 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638142466 |
Product | transcription termination factor Rho |
Protein accession | YP_758189 |
Protein GI | 114571509 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG AAATTTCCGC ACCTGTCCCC GCCCTGCTTG AAGGTCTGGA GCGCATGACG CTGCAGGATC TCAAGGAGAA AAAACCGACA GAACTGGTTG AGTTTGCCGA AGCACTCGAG ATCGAGAATG CCTCGTCCTT GCGCAAACAG GCCATGATGT TCGCCATTCT CAAGTCCCTT GCAGAACGGG ATGTAGAGAT TCATGGCGGC GGCGTCATGG AAGTGCTGCA GGACGGGTTC GGTTTTCTGC GTTCACCGGA ATCAAATTAT CTGGCCGGAC CGGACGATAT CTATGTGTCG CCAACCCAGA TCCGGAAGTT CGGGCTGCGT ACGGGAGATA CGGTCGAAGG CGAGATCCGC AGTCCACGCG ATGGCGAACG CTATTTTGCG CTGCTGAAAG TCTCAACGAT CAATTTCCAG GATCCGGAAT CGGCTCGTCA CAAGGTCCAC TTTGACAATC TGACCCCGCT CTATCCGGAA AGCCGCTTCA ATATGGAGCT GGCCGATCCG ACCGTGAAAG ATCGTTCCGG TCGGGTCATC GATATCGTCT CGCCGCTCGG CAAGGGCCAG CGCGGACTGA TCGTGGCGCC GCCTCGGACC GGTAAAACCG TGCTGCTGCA AAACATCGCC CATGCCATCG AGAGCAATCA TCCGGATTGT TATCTGATGG TCCTGTTGAT CGATGAGCGG CCGGAAGAAG TGACGGATAT GCAGCGTACC GTGAAGGGTG AGGTGATTTC CTCCACCTTT GATGAGCCGG CAACGCGTCA CGTCCAGGTC GCTGAAATGG TGATCGAAAA AGCCAAACGC CTGGTGGAGC ACGGCCGCGA TGTCGTGATC CTGCTCGACT CGATCACGCG TCTCGGCCGG GCCTACAACA CGGTGGTCCC GTCCTCGGGC AAGGTGTTGA CCGGTGGCGT CGATGCCAAT GCCCTGCAGC GTCCCAAGCG CTTCTTTGGT GCTGCCCGGA ATATCGAGCA TGGCGGATCG CTGACCATCA TCGCCACGGC GCTGATCGAT ACCGGGTCGC GTATGGATGA AGTCATCTTC GAAGAGTTCA AGGGTACGGG TAACTCGGAA GTCGTGCTGG ACCGCAAGGT GGCTGACAAG CGTGTCTTCC CGGCCATCGA CATCCTCAAA TCCGGTACTC GGAAAGAGGA ACTCCTGGTC GATCGTGGTC AGTTGCAGAA AATGTATGTC CTGCGCCGTA TTCTCAATCC GATGGGTGCC CAGGATGCGA TCGAGTTCCT GCTCGACAAG CTGCGTCAGA CCAAAACCAA TGATGAGTTC TTCGACTCGA TGAATACCTG A
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Protein sequence | MTDEISAPVP ALLEGLERMT LQDLKEKKPT ELVEFAEALE IENASSLRKQ AMMFAILKSL AERDVEIHGG GVMEVLQDGF GFLRSPESNY LAGPDDIYVS PTQIRKFGLR TGDTVEGEIR SPRDGERYFA LLKVSTINFQ DPESARHKVH FDNLTPLYPE SRFNMELADP TVKDRSGRVI DIVSPLGKGQ RGLIVAPPRT GKTVLLQNIA HAIESNHPDC YLMVLLIDER PEEVTDMQRT VKGEVISSTF DEPATRHVQV AEMVIEKAKR LVEHGRDVVI LLDSITRLGR AYNTVVPSSG KVLTGGVDAN ALQRPKRFFG AARNIEHGGS LTIIATALID TGSRMDEVIF EEFKGTGNSE VVLDRKVADK RVFPAIDILK SGTRKEELLV DRGQLQKMYV LRRILNPMGA QDAIEFLLDK LRQTKTNDEF FDSMNT
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