Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_2696 |
Symbol | |
ID | 4286096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2949357 |
End bp | 2955941 |
Gene Length | 6585 bp |
Protein Length | 2194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638142195 |
Product | outer membrane autotransporter |
Protein accession | YP_757920 |
Protein GI | 114571240 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.533245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGCA TGCGACAGGG TGTCCGCCGT TTGGGTAGCC GTTGGTTTTC GGCCGCGGCG GCGTTGCCTT CAAAGATTGC CGGGCTCGGT CTTGCTGCCG GACTCGCAAG CATGGCCCTT CCCGTCCAAG CCATGGCTAT CCCGGCCGCT GCGCCACGAT TGGAGTGGGC GTCCGGGTCT ACCTACACCA ACGCCGACAC GCTGACCTTC GGCCTTTCAT TTGATACCGA CGTCCGCAAT GCGGACCCGA CCGATTTCGA GATGCTCGGC ACGACAGCGA CAATTACCAG CATCGTGATG CAGGGGGGTA GCTCGAGCTC CTATCTGGCC ACCGTCTCAG GCGGTGACCT GGCAGACCTG AACGGTTCCG TGCGCCTCAT CCTGTCCGCT TCCCAGGACA TTGAAAATCT TGCTGGCGCC CCGTTGACCG ACCTCGCGAC GGTCAATCCG GAAGACACGA TAGTCAACAA TACCCGGCCC GATTGCGCGT TTACGACGGC AGCGACGGCG CCTGTCACGT CCACATTCAC TGTCGACGTG ACATGCACAC CGCAGAATGG CTGGGCTGAC ACCATCATCG GGTTCGAATC CAGCGACCTG GTCCTGTCAA ACGCAAGCCT TGAGAGCTTT TCCTTCACGT CCAGCACCTA TGCCGGCAGC TTTGTTCTGC GGCCGCTGGA TTCGGGAACC GTTACGGTCG ATTTGCCCGC TGACAGTCTT TACGATGAGG CCAGCAACAC GAACACGGCG TCGACACAGT TCTCAATTTC ATCGGACGTG ACCGTGCCGA CCGTCACGAT GAACCCCTGG TCCCTGTCGC CCTATTCCGG ACCCCTCACG CTGGGTATCA CCTTCTCCGA AAGTGTGACC GGGTTCGACC CGACGACCGA TCTCGTTCTT TCCAACGCAA CCATTGCCGT GCTGAGTTCA AGTTCACGCT CTTTCACGCT GACCGTCACG CCGACCGCTC AGGGGGCCTT CACGGTTGAC CTTCCTGCCG GGGTTGCCGT CGATGCAGAC GGGTTCGCCA ACACCGCGGC GACGCAGTTT GCGGGCGTCT ATGACACCGA TGCGCCGGTC TACACGCTCA GCAGCGCGGT CGCGTCGCCA GCCATCGACA ATTTCACTCT GGATATCAGC GTGTCTGAAG ACGTCCATTT CCAGTCGAGC TATCTGACCG TGACCAATGG TACGGCATCG GGGCTCTCCG GTTCGGGGTC GAACTACCAG GTCACAATTC GACCGAGCTC CAACACCGAG GGCACTGTCA CCGTGGAACT CGAAGCGGGC GCGGCGCCGG ACAGGGCCGG CAATGACAAC GCTGCCGCAA CGCCCTTCTC GGTCGCCTAT GATGTGAAAT CCCCGCAAAT CGATTTGATC GAACGCCTGT CTCCAGCCGC TGCGGTCACC AATGCGGACA GTCTGACTTT CGCCGTGACC TTCACCGAAG ACGTGACCGG ATTTGATGCC GGCGATCTTC GAATTCTCAG TGATGAAGCC ACAACACCGA CGACCGGAAC CATCACCCAG GTCGTCGCGA CGTCAGCCAG CCAATATCAA GTGACTGTCA GCGGCGGCAA TCTGGCCTCT ATCGGTGGCA ATTACAGCAC CGGAGCAAGC GCCTCGCTGA CCGTGTTCGC GACCACGTCC CCAACGGTTG AGGATATCGC CGGTCGGGCG ATGACCAGCT ATTCGGCCGC GACCACCCAA GAGTATTATG AGATCGACAA TACGCAGCCG GGACTTACGA TTTCCGGCCC GGCGCTGGGA ACATCCAACT TCACGGTGAC GTTTACGTTC GCCGAGGACG TCACAGGCTT TTCCCTGGAT GATGTCGTCG CGACCAATGT CACGCTCGCC AATCTGTCGG GAAGCGGCGA TGTCTACACC GCTGAAGCGA CCGCGTCGGG TGGCACGCCG ATCACGATCA ATGTTGCCGC AGGCGCGGCG CAGGATGAGG CAGGCAATAC AAGCACCGCC GCGTCCGAAT TCTCGATCGC CTTTGACGAG ACGGCGCCGA CAGTGCTGTC TATCGAGCGC GATACGCCAA CAGGCGAGTA CACCAATGCC ACCAGCCTGA CCTGGCTCGT GACTTTCTCC GAAGCCGTGC AGGGTGTTGG AATCCCGGAT TTCGCGGTCG ATGGAACGAC CGGCTCCGTG ATTTCTGTCG CCAGTGCGGG TGGCAATGCC TATGACGTGA TTGTCGGTGG GGGTGACCTG TCCACGATGA CCGGTACGGT TACGCTGTCG TTTGCGGCGG GCGCATCGAT CACCGACGCC AATGGTCTGG CCCTGACGGA AGCCAGCCCG AGTGGCACCA ATGAGGACAG CTATCGGGTC TCCCACGCGG CCCCGGTCAT CGCCAGCCTC ACGCGCCAGA CACCGGCGAG CGAATACACC AATGCCGACA GCCTCACCTG GGACATGCAG TTCTCGTCGA TCTCCAGCTT TTTCTCGCTC GATGCCGATG ATTTCACGCT GACGGGCACG ACGGCAGACC TTGCGGTCAC CCGTTATTCC ATCGGCTTCT ACATCACTGC GTCGGGCGGT GACCTGGCGA GTTCCAATGG TGAGATTCGC CTGCGCCTGA ACAGCGGCAT CTATCCGGAT GAATTCGGCA ATGAGCTGAA TGGCAGTACC GATCCGACCG GGGCCAATGA AAACACATAT TGGCTCGACA ACACGGTGCC GACGGTCGCG ATCTACACTG ACGGGCCGGG CGGGAGTTCA GACCCGTTTG AAGTCACGGT GGCGTTCTCC GAGGTTGTCA GCGGGTTTGA TGCCAGCGAT CTCGATATCG GCAACGCGAC CGCGTCCGAG ATCGTTGAAA CCCTCGCCGG CCGGTTCTTC ACCTTCAACC TGACACCGAG CGGGGACGGG TTGGTTTCCC TGGCCGTCAA TGCCGCCATT GCCCAGGATG CGGCGGGCAA TGACAACACG GCCGCGGAAA CCTGGTCGGA GTATTTCGAC AATACCGCAC CGTATGTGAC CAATGTCGAA TTCGTCACCA CCGGCGGATC GCCGACCAAT TCCGACACCT TGCAGTGGGC GATCGCCCTG TCTGAAGCGG TCGAAAATGT GGATGCGAGC GACTTTGCGC TCCTCAATTC CTTTGGCAGC ACCCTCTCAA TCAGTCAGCC GCAATCGACG GTCATCGTCG TCTCGGCTTC CGGCGGTGAC CTGGCCAACA AGGAGGGGCT GGTGACCCTG ACCACCGGCA GCCTGGACAT TGCGGACCTG GGCGGCAACC GGCTTACCTC CATGGAGGTG ACGGGCGGCA CCGACGAGCG CGCCGTGACG ATGGACAATA CTGCGCCGGT CGTCTCGTTC AGCTATGACG ATTACTACGT GTCCGGAAGT TTCGACGTCG CCGTCAATCT GAATGAAGCC GTGACCGGTT TCACGAGCGA CGACCTTGCG GTGAGCAACG GGACCGTGAC GGCGCTGGTC GCGAATGGCG ACAATTTCAT TGCCACGATA TCACCGACAG CGGCCGGCCA GATCAGTCTC AGCCTCGCCC CCGATCAGAT GACGGATACG GCGGGCAATG GGAATGCGGC GGCGGGCCCG AGCTATTTTG TCTACGACCC GGTCGCGCCG AGCCTCACCA CGATCGCGCG GGCCTATCCG ACCGACGAGA CAACCGACTC CGATTATGTT GTCTGGGGTA TCAACTTCTC GGAAACCGTC GGCAATGTCG ACGCGAGCGA TTTCCAGATC GCCGGGACCA CGGCGACACT GTTTGTCAGC GGTGGCCGTG GCGGGGATGC GGGAGGTTCG GGCAGCCGGG CCAGTGCAGA AGACCGTGGA CCGGGCGGGC CCAGCTACCA GTACTCGGTG ACGGCACAGG GGGGTGACCT GGCGACACTC AACGGCACGG TGACCTTGTC CCTCGCCAGT GGCAACGACA TTGCTGATGT CGCGGGCACC ACGTTGGCGA GCACGGTCCC GACCGGCACC AATGACAACA CCTTCATCCT TGAAAATGAT GTCCTTGCCC CGACGGTCGT CCTGTCGAGC GCGTCAAGCG ATCCGGTCTC CGGCGCGTTC ACGCTGGACG TAGCCTTTTC GGAAGACGTC ACCGGCTTTG CCCTGGAAGA CCTTGTGGTC TCCAACGGCA CGGCCTCGGA CCTGTCCGGT TCCGGTGCAG ATTACACGGT GACCATCACG CCCGCTGGCG ATGGCGCCGT GACCGTTGAC CTGGCCGCAG ATTCCGCATC CGACGATGCC GGCAATGGCA ATGTCGCGGC GACCAGCTTC ATCATCGAGA ATGACCAGTC CGCGCCGAGC GTGGTGCTGA GCTCTGCTGC GGCCGAACCG GTTGTCGACG CCTTTACGCT GATCATCACC TTCAGTGAGG ATGTCACCGG CTTTGAGCTT GCTGATCTTG TGGTCACCAA TGCCGATCTG TCTGACCTCG CGGGCGACGG GGCGGTCTAC ACCGTGGTCG TGACCCCGTC CGGCGGCAGC CCGGTTGCCG TTGACCTTGC CGCCGACAGT GCTGTCGATG GCGCGGGCAA TGGCAATACT GCGGCGGACA CCTACGCCAT CATCACCGAC AACACACCGC CGAACCTGGA AATCTCCGTG CCGGGCGAAG AGACCGAGGG CGTGTTCACC GCGACCTTCC TGTTCTCGGA AGCTGTAACC GGGTTCGAGG CGGATGACAT AACGGTCACC AATGGTGACC TGTCGGAGTT CACGGCCATA GACGAGACCA GCTGGTCGGT GACGGTGACG CCGCAGACCA TCGGCACGAT CACGCTCGGC GTTGCCGCCG GCGCCGCTGA GGACGCCGCA GGAAACGCGA GCCTTGCCGC CGAGGCAAGT CTCGAGGCTG TTGCCGAGCC GATCGAAGTG GCTGTTGTGG TGGCCGAAGA CGTCGAAGAT CCGACTGAAA TTTCGGCCAC GGCGCGGGTC ACCAATCCCG GCAGCCAGCC GGTCGACTTC CTGGTCGAGG TCGATGTGCC CTGGCTTGAT GTTGACCCGA GGAGCGGAAC GATCCCGTCG CTGGGTGAGC TGGAACTGAC CATCGCGGTC AATGAGTTCG CCAACGATCT GGAAGCGGGC ACCTATACCG GCACCGTGAC CGTGATCAAT CTCAGCGGTG GCGGGGCTGC CGCCAAGACG CCGAACGCCC ATGCCCGGGC GGCCGGGAAC ACGACTGTCG TGGCGATCCC GCTGACGGTA ACCATCGCCG AGCGCCGCGG CTCGATCCAG CTGGTATCGA CCACGCCGGG TGGCGTGCAA CGGGACGCGG TCTTCGACTT CGTCTCGTCG GATGCAGACC TGGATGCCAT CAGCCTGGCC ACGCAAGGTG GACATGCGGC GAGTACGCCG GTCCGCAAGC TGCTGGGCAG CTACGACGTC ACCCAGATCC TGCCCGAGGG TTGGCGGCTC GACTCGCTCT CCTGCATTGG TGACACCGAC AATGGCAGCG TGATCGATCT GGCGGCCGGA CGTGTCGACA TCGATCTCGA TGCCAACGAG ACCATCATCT GTACCTTTGC CAATACGCGT GACGAGGCGG AAGTCCGCCT GGCGACCCAG CGTGCGATCC GAAACTTCCT GGTTCGCCGC GCTGACAGCC TTCTGAATGC GGCACCGGAC CTGACGCGTC GCGTCCGGGA TCGGAACACG ACTTCGCCCG GCCAGTTCTC GGCCGATATC AATGGCGGCA ATCGCATTGT GTCGATGGGT GCCAGCCTGG CCGGCATGCG CTATCACGCC GCCGCCAGCA CGCCGCAAAT GCCTGGCGAG GACGGGGTCC GGCCGGCTGA CAGTGGCAAT GCCGACATCT GGCTTGCTGC CAACTACGCC TCCGTGTCCG ATGAACGTTC GGGCGATGCT GCCGACAGCG CCTTTGGCGT GGTCCAGCTG GGTGTCGACT GGGCGGTCGA TGACCGGACG GTTGCCGGTG TGATGCTGCA GCATGACTGG GCCGACGAGA CTACGGACGA GATCGCCATA CGGGCTGGAG CCGTCCGCGG CGCCCGGGTC AGTGGATCCG GCTGGATGGC GGGTCCCTAT GTGGTGCGCG AGATCCGTGA GGGTGTCTGG TTTGATGCCC TGGCCCTCTA TGGCCAGTCC GACAATACCG TCGACCCTTT GGGGCTCTAT GAGGACACTT TCGAAACCGA CCGTTTCATG GTTCGCATGA ACCTGTCGGG TGAGTGGCGG TCCGGTGACT GGCGGATCCG TCCGAGTGTC AGCCTCGCCC ACTTCCAGGA GACCCAGGAC GGCTATTCCG ACTCGCTCGG GATCAGCATT CCCGAACAGA CCATCGCAAT CGGTCGCCTG CGTGCCGGTC CGGAGATTGC CTATCGCTTC GATACGGCGA CCGGCGGTTG GTGGGAGCCG ACAATCGGCC TGACCGGCGT TTGGGACTAC AACCCCGCCG AATTGCTCGA CCTTGACGGC CAATTGGTCG GTACCGGTGG CCTGCGGGCC GACGCCAAGC TGGGCCTGCG TGGTCAACTG GCGCCAGGCG CATCGATCCT GCTGGAAATG GATATCGACG GGCTGGGGGA AGCCGATTTC GAGGCGCGCG GGGCGCGGGT CGAGGTGCGG TTCAGCTTCA ACTGA
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Protein sequence | MFRMRQGVRR LGSRWFSAAA ALPSKIAGLG LAAGLASMAL PVQAMAIPAA APRLEWASGS TYTNADTLTF GLSFDTDVRN ADPTDFEMLG TTATITSIVM QGGSSSSYLA TVSGGDLADL NGSVRLILSA SQDIENLAGA PLTDLATVNP EDTIVNNTRP DCAFTTAATA PVTSTFTVDV TCTPQNGWAD TIIGFESSDL VLSNASLESF SFTSSTYAGS FVLRPLDSGT VTVDLPADSL YDEASNTNTA STQFSISSDV TVPTVTMNPW SLSPYSGPLT LGITFSESVT GFDPTTDLVL SNATIAVLSS SSRSFTLTVT PTAQGAFTVD LPAGVAVDAD GFANTAATQF AGVYDTDAPV YTLSSAVASP AIDNFTLDIS VSEDVHFQSS YLTVTNGTAS GLSGSGSNYQ VTIRPSSNTE GTVTVELEAG AAPDRAGNDN AAATPFSVAY DVKSPQIDLI ERLSPAAAVT NADSLTFAVT FTEDVTGFDA GDLRILSDEA TTPTTGTITQ VVATSASQYQ VTVSGGNLAS IGGNYSTGAS ASLTVFATTS PTVEDIAGRA MTSYSAATTQ EYYEIDNTQP GLTISGPALG TSNFTVTFTF AEDVTGFSLD DVVATNVTLA NLSGSGDVYT AEATASGGTP ITINVAAGAA QDEAGNTSTA ASEFSIAFDE TAPTVLSIER DTPTGEYTNA TSLTWLVTFS EAVQGVGIPD FAVDGTTGSV ISVASAGGNA YDVIVGGGDL STMTGTVTLS FAAGASITDA NGLALTEASP SGTNEDSYRV SHAAPVIASL TRQTPASEYT NADSLTWDMQ FSSISSFFSL DADDFTLTGT TADLAVTRYS IGFYITASGG DLASSNGEIR LRLNSGIYPD EFGNELNGST DPTGANENTY WLDNTVPTVA IYTDGPGGSS DPFEVTVAFS EVVSGFDASD LDIGNATASE IVETLAGRFF TFNLTPSGDG LVSLAVNAAI AQDAAGNDNT AAETWSEYFD NTAPYVTNVE FVTTGGSPTN SDTLQWAIAL SEAVENVDAS DFALLNSFGS TLSISQPQST VIVVSASGGD LANKEGLVTL TTGSLDIADL GGNRLTSMEV TGGTDERAVT MDNTAPVVSF SYDDYYVSGS FDVAVNLNEA VTGFTSDDLA VSNGTVTALV ANGDNFIATI SPTAAGQISL SLAPDQMTDT AGNGNAAAGP SYFVYDPVAP SLTTIARAYP TDETTDSDYV VWGINFSETV GNVDASDFQI AGTTATLFVS GGRGGDAGGS GSRASAEDRG PGGPSYQYSV TAQGGDLATL NGTVTLSLAS GNDIADVAGT TLASTVPTGT NDNTFILEND VLAPTVVLSS ASSDPVSGAF TLDVAFSEDV TGFALEDLVV SNGTASDLSG SGADYTVTIT PAGDGAVTVD LAADSASDDA GNGNVAATSF IIENDQSAPS VVLSSAAAEP VVDAFTLIIT FSEDVTGFEL ADLVVTNADL SDLAGDGAVY TVVVTPSGGS PVAVDLAADS AVDGAGNGNT AADTYAIITD NTPPNLEISV PGEETEGVFT ATFLFSEAVT GFEADDITVT NGDLSEFTAI DETSWSVTVT PQTIGTITLG VAAGAAEDAA GNASLAAEAS LEAVAEPIEV AVVVAEDVED PTEISATARV TNPGSQPVDF LVEVDVPWLD VDPRSGTIPS LGELELTIAV NEFANDLEAG TYTGTVTVIN LSGGGAAAKT PNAHARAAGN TTVVAIPLTV TIAERRGSIQ LVSTTPGGVQ RDAVFDFVSS DADLDAISLA TQGGHAASTP VRKLLGSYDV TQILPEGWRL DSLSCIGDTD NGSVIDLAAG RVDIDLDANE TIICTFANTR DEAEVRLATQ RAIRNFLVRR ADSLLNAAPD LTRRVRDRNT TSPGQFSADI NGGNRIVSMG ASLAGMRYHA AASTPQMPGE DGVRPADSGN ADIWLAANYA SVSDERSGDA ADSAFGVVQL GVDWAVDDRT VAGVMLQHDW ADETTDEIAI RAGAVRGARV SGSGWMAGPY VVREIREGVW FDALALYGQS DNTVDPLGLY EDTFETDRFM VRMNLSGEWR SGDWRIRPSV SLAHFQETQD GYSDSLGISI PEQTIAIGRL RAGPEIAYRF DTATGGWWEP TIGLTGVWDY NPAELLDLDG QLVGTGGLRA DAKLGLRGQL APGASILLEM DIDGLGEADF EARGARVEVR FSFN
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