| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2612 |
|---|
| Symbol | |
|---|
| ID | 4285960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2829483 |
|---|
| End bp | 2830532 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638142111 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_757836 |
|---|
| Protein GI | 114571156 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCCTGA TTGATGCGGT GCAATTGCTG ACGGCCTATC ATGCCGGTGG ACTGGCCGGC
TATTTGCTGG TCCGCCGCAT CTCACCGAGC CTCGCCATCC TGTGCCTAGT CTTTGCCACC
CACATGCTGG CCAACCTGGT GACCACGCTT GCCCAGCTAC CGCCCCAGGC CAATATCACC
AGTGCGTTCG GACTGCTTTA CGGCCCGGCG TTCTGGCTGT TCGTACGGGG GCTGTGCTAT
CGCGAGGCCC GGCCGGGCTG GCGGGACCTC ATTCACCTGG TACCAGCGCT TCTGGTGATC
CTGATCCGAC CCGCCGACCC CTGGCCCCAA CTGGCCGGCC TGCCCCTGCT GATCGGCTAT
CTGGTCGCCA CCTTCCTGGC GTTGCGGGAG CACGGGCGTT TGGCCGGGCA GGTCCGCGCC
GATGACGACC GGGTCAGCCT GCGCTGGGTC CGGCAAGCCT TTTTTGCCTT TGTGGCGATC
GCCGCCTTCG ACATTGGCCG CTCCGCCTTC GCCGCCCGCC TGCCCGGCCT TGACGATGCC
GGCCTGGCCC TGGTCCTGGT TGCGGTGACG GCCCTGCTGA GCGCACTGAC CTGGCGCAGC
CGTGAACATG TCCGCGACCG CGGGGCGCTG TCACCGCGCG GACTGGAAGC CGGGCGGGCC
GGCGCCGCGT CCGGACCGGA TGACGCCGAC GCCCTGGCCG ACTTCAGCCG TATCGACGCG
ATTGTGCGCC GTCAGGAATT ATGGCGCGAA CCGCGCCTGT CGCTGGCCGA TGTCGCCCGC
GAGGCGGGTG GCAGCACACG CGACGTTTCG CGCGCGGTCA ACGCCGGCAG CGGACGCAGT
TTCTCCGCCT ATGTGAACGG GCTGCGGATC GACGCCGTCG ATGCCCTGAT GTCCGACCCG
GAGCGCAGCG ATGCCACCCT GCTCACGCTT GCTTTCGAAG CCGGGTTCAA TTCCAAGTCC
GCCTTCAACC GCCTGTACCG GACAGTTCGT GGCGAGACAC CGAGCCGGGC CTTTGCACGG
GCTGCATCGG CGCGCCTCAG CCGCGACTGA
|
|---|
| Protein sequence | MTLIDAVQLL TAYHAGGLAG YLLVRRISPS LAILCLVFAT HMLANLVTTL AQLPPQANIT
SAFGLLYGPA FWLFVRGLCY REARPGWRDL IHLVPALLVI LIRPADPWPQ LAGLPLLIGY
LVATFLALRE HGRLAGQVRA DDDRVSLRWV RQAFFAFVAI AAFDIGRSAF AARLPGLDDA
GLALVLVAVT ALLSALTWRS REHVRDRGAL SPRGLEAGRA GAASGPDDAD ALADFSRIDA
IVRRQELWRE PRLSLADVAR EAGGSTRDVS RAVNAGSGRS FSAYVNGLRI DAVDALMSDP
ERSDATLLTL AFEAGFNSKS AFNRLYRTVR GETPSRAFAR AASARLSRD
|
|---|
| |