| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2406 |
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| Symbol | |
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| ID | 4285596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 2618843 |
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| End bp | 2619850 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638141910 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_757636 |
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| Protein GI | 114570956 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0234677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA TCGCCGAAAC CCGCACACTG GAAGCAACCG AGGAAGATGC GGGGCAGCGA
CTGGATCGTT GGCTGGCAGC CTCGGTTGAG TCCCTCTCAC GCTCGCGCCT GAAAGCGCTG
ATCGAAGCCG GGCAGGTGGC GGTGGACGGC GTCGCCGTGA CCGACCCCTC CGCCAAGGTA
CTTGCCGGAA GCGAGTATAC GGTCGGCATT CCGGAACCGC GGGCCGACAC ACCGACACCG
GAACCGATGG ATCTCGATGT CCTGCACGAA GACGACCACC TGATCGTGAT CAACAAGCCG
GCCGGCCTGT CAGTCCACCC CGCTGCCGGG AATTGGACCG GCACGCTGGT GCACGGCCTG
CTGCATCATT GCGCCGGCTC CCTGTCCGGC ATTGGCGGGG TCGAGCGCCC CGGCATCGTG
CACCGTCTCG ACAAGGAAAC ATCCGGCGTC ATGGTCGTGG CCAAATCGGA TGTGGCGCAC
AAGGGGTTGA GCATCCAGTT CGCCCGACAC ACCGTTGAGC GGGCCTACAT CGCCTTCACC
CGCAATGCTC CCAGCCCGAA GGCCGGCCGG ATCGCGACGC AGCTGGCCCG CTCCTCGCGC
GACCGCAAGA AATTCGAGGT CCCGCATGAC CCCAATTCGG AAGCCGGCAA GCATGCGATC
ACCAATTATA CGACCCTGAA ACGCTTCGGT CAGGCCGAAG GCGCGGCGAT CGGCACCGGC
ATGGCGGCCA AGGTCGAATG CCGGCTTGAA ACGGGACGCA CCCACCAGAT TCGTGTTCAC
ATGGCGCATA TCAACTGTCC GCTGTTGGGC GACCCGGTTT ACGGGCAGAA ACGCGGTCGC
TTGCTCGAAT ATGATGATGA CAGCGGAACC CTGCGCGCCT TCCGCCGCCA GGCATTGCAT
GCCGCGATCC TGGGCTTCGA GCATCCGGTG ACCGGTGAAG CGCTGCGGTT TGAAAGCGAG
CTGCCCGACG ACATGAAACG CGTCGAGGCG ATCCTGGAAA CGCTTTGA
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| Protein sequence | MTDIAETRTL EATEEDAGQR LDRWLAASVE SLSRSRLKAL IEAGQVAVDG VAVTDPSAKV
LAGSEYTVGI PEPRADTPTP EPMDLDVLHE DDHLIVINKP AGLSVHPAAG NWTGTLVHGL
LHHCAGSLSG IGGVERPGIV HRLDKETSGV MVVAKSDVAH KGLSIQFARH TVERAYIAFT
RNAPSPKAGR IATQLARSSR DRKKFEVPHD PNSEAGKHAI TNYTTLKRFG QAEGAAIGTG
MAAKVECRLE TGRTHQIRVH MAHINCPLLG DPVYGQKRGR LLEYDDDSGT LRAFRRQALH
AAILGFEHPV TGEALRFESE LPDDMKRVEA ILETL
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