| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2239 |
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| Symbol | |
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| ID | 4284492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 2440450 |
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| End bp | 2442261 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638141741 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_757469 |
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| Protein GI | 114570789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.478529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0257492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACA CCACCGCAAC GCCGGGCAAT GCGCCCAATC AAGACAACAA GGACACCTCC
TTCTTCGGGC ATCCGAAGGG TCTGGCAATC CTGTTCCTGA CCGAGATGTG GGAGCGCTTT
TCCTATTACG GGATGCGCGG CCTGCTGATC ATCTATCTGA CGCAGCACTT CCTGTTCTCG
GACGAGAGCT CGGGCATCAT GTATGGCGCC TACACGGCGC TGGTCTACAT CATGACCATC
ATCGGCGGCA CGCTTGCCGA CCGTTATCTC GGGCAGCGAA AGGCCGTCAC CTACGGGGCG
ATCCTCCTTG TCATCGGTCA CGGCCTGATG GCTTTCGAGG GCAGTGGCTC GCGTGAGGTG
TTTGACTATG AGGGCGCGGA ATACCAGCTG ACGCTGGACG GTCGCGGCGG TGACGCCAAC
CAGATCGTCG TGGCAGCGGA CGGTGCGATC TCGCAGATCA GCTTCGTCGA AAGTGGTACC
GTGATGCAGG TTGCAGAACC GGACCTCGTC GGCCTGCCGG CTGAAATGCC CTTCTCCAGC
GACATGACCC GGATCGAGCG CGAGGAGTTG TACGTCAACA TCCTCTATTT CGCCCTGGCG
TTCATCATCG CCGGCGTCGG CTTCCTGAAA GCCAATATCT CCACCATTGT CGGCTCGCTC
TACGGGCTGG GCGACACGCG TCGGGATTCG GGTTTCACGA TCTTCTACAT GGGCATCAAT
CTGGGGTCCT TCCTGGCCTC CTTCTCGGTT GGCATTATCG GGATCTACTG GGGTTGGGCC
TGGGGCTTCG GTCTGGCCGG TATCGGCATG TTGGCCGGCC TTTTGACCTT CCTCTTCTTC
CAGCCCTGGC TTGAAGGCCG CGCCGAGCCG CCCAACCCGG CCAAGCTGAA GGAAAAGGTC
CTCGGCTTCA TGAATGTCGA ATGGGCCTGC TATGCGACCG GTATCGCCAT CGTCCTGGTG
TCGATGCTGA TCGTGAAATT CCCGGACATG TTCGCCGATG TGGCGGGCTG GCTGGGCATC
GCCATGTTCC TGGTCCTGAT CGGCTATGCC ATCACCAAGA CCCAGGGCGA TGAGCGCAAG
AAGATGTTCG CGGCGATCTA TTTCGTCCTC GCGCAGATCC CGTTCTGGGC CCTGTTCGAG
CAGGCGGGCT CCTCGCTGAA CCTGTTCACT GACCGTCTGG TCGACCGCAC CATGTTCGGC
TGGTCCGTTC CGGCGCCAGT CTTCCAATCG CTCAATGCGG GCTTCATCTT CCTGTTTGCG
CCGATCATGG CGTGGCTGTG GATTTCGCTG GCGAAAAAGG GCTGGAACCC GTCGACACCG
GTCAAGTTCG CGCTGGGTGT CTTCCTCGCA GGTCTGGGTT TTTACACCCT GGTCGGCGGC
ATGGGTGCCA GTGGGGCGAC GGGCCTGACG GCCGTCTACT TCATCTTCCT GATCTACTGG
ATCCACACCA TGGGTGAGCT GATGGTGTCG CCAGTCGGCC TGTCGGCCGT GACCAAGCTG
GCCCCGGCCC GTGTGGTCGG CATGACGATG GGGGCCTGGT TCCTGTATTC AGGCCTGTCC
AACTTCCTGG CCGGTGTAAT CGCATCCTCG ACCGGTGCCG ACACGATCGG CGGTCAGCTG
ACCGACGTCG CAGCGGCCAA GGCGGGCTAT GTCGAGGTCT ATTCCAATGT CGGCCTGGTC
GGCATGGGTA TTGCCCTTCT GATGCTTCTG ATCTCGCCGC TCATCAAATG GCTGATGGCG
GGTGCGGACG GCACGACGAT TGTCGCGCAC CCGACCGAGA CCGAAGCTGG CGGACCCTCC
GTGGACCGCT AG
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| Protein sequence | MTDTTATPGN APNQDNKDTS FFGHPKGLAI LFLTEMWERF SYYGMRGLLI IYLTQHFLFS
DESSGIMYGA YTALVYIMTI IGGTLADRYL GQRKAVTYGA ILLVIGHGLM AFEGSGSREV
FDYEGAEYQL TLDGRGGDAN QIVVAADGAI SQISFVESGT VMQVAEPDLV GLPAEMPFSS
DMTRIEREEL YVNILYFALA FIIAGVGFLK ANISTIVGSL YGLGDTRRDS GFTIFYMGIN
LGSFLASFSV GIIGIYWGWA WGFGLAGIGM LAGLLTFLFF QPWLEGRAEP PNPAKLKEKV
LGFMNVEWAC YATGIAIVLV SMLIVKFPDM FADVAGWLGI AMFLVLIGYA ITKTQGDERK
KMFAAIYFVL AQIPFWALFE QAGSSLNLFT DRLVDRTMFG WSVPAPVFQS LNAGFIFLFA
PIMAWLWISL AKKGWNPSTP VKFALGVFLA GLGFYTLVGG MGASGATGLT AVYFIFLIYW
IHTMGELMVS PVGLSAVTKL APARVVGMTM GAWFLYSGLS NFLAGVIASS TGADTIGGQL
TDVAAAKAGY VEVYSNVGLV GMGIALLMLL ISPLIKWLMA GADGTTIVAH PTETEAGGPS
VDR
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