| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2098 |
|---|
| Symbol | |
|---|
| ID | 4284525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2283490 |
|---|
| End bp | 2284395 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638141599 |
|---|
| Product | SSU ribosomal protein S6P modification protein |
|---|
| Protein accession | YP_757328 |
|---|
| Protein GI | 114570648 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.247188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TCATGCTGGC CCGCAATCCG AACCTCTACT CGCACAGGAG ACTCGTTGAA
GCGGCTGAGG CCCGGGGCCA TGAACTCGAC ATCTATGATA CGCTGAAGAT GTACATGAAC
ATCACCTCGC ATCGCCCCGA AGTGCGTTAT CAGGGCCGTG TTCTGAGTGG TTATGACGCG
ATCATCCCGC GGATCGGGGC CTCGATCACC GGTTACGGCA TGGCGGTGGT CCGCCAGTTC
GAGATGATGG GCGTCTGGGC GCTCAACGAG TCGGTCGCCA TCGGCCGCTC GCGCGACAAG
CTGCGCTCGC TGCAACTCCT GTCGCGCGCC GGCCTCGGCC TGCCGGTGAC GGCCTTTGCC
CACGACACCT CGATGACCGA TGACGTGCTC GACATTGCCG GTGGTGAGCC GGTGGTGATC
AAGCTTCTGG AAGGCACGCA AGGCGTTGGC GTGGTACTGG CGGAAACGCG CCGTTCGGCC
AAGTCCGTGA TCGAAGCCTT CCGCGGCGCC AAGGTCGATA TCCTGGTGCA GGAATTCATC
AAGGAGGCCG GCGGCGCCGA CATCCGCACC ATCGTGGTTG GCGGCAAGGT TGTCGCGGCG
ATGAAGCGCC AGGGTGCCGA GGGCGATTTC CGCTCCAACC TGCATCGCGG CGGCTCGGCT
TCGAAGATCA AGCTGACCCC GGAAGAACGC TCGACCGCCG TCCGTGCCGC CAAGGTGATG
GGGCTCAATG TCGCCGGTGT CGACATGCTG CGCGGCAATC ACGGCCCGTT GATCATGGAA
GTGAATTCCT CGCCGGGCCT GGAAGGCATC GAAGCCTCGA CCGGTGTCGA TGTGGCCGAC
AAGATCATCG ATTTCGTGGA AAAAACGGCG GTGGCCGGCA AGACCAGGAC ACGTGGTACC
GGATGA
|
|---|
| Protein sequence | MKLLMLARNP NLYSHRRLVE AAEARGHELD IYDTLKMYMN ITSHRPEVRY QGRVLSGYDA
IIPRIGASIT GYGMAVVRQF EMMGVWALNE SVAIGRSRDK LRSLQLLSRA GLGLPVTAFA
HDTSMTDDVL DIAGGEPVVI KLLEGTQGVG VVLAETRRSA KSVIEAFRGA KVDILVQEFI
KEAGGADIRT IVVGGKVVAA MKRQGAEGDF RSNLHRGGSA SKIKLTPEER STAVRAAKVM
GLNVAGVDML RGNHGPLIME VNSSPGLEGI EASTGVDVAD KIIDFVEKTA VAGKTRTRGT
G
|
|---|
| |