| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2012 |
|---|
| Symbol | |
|---|
| ID | 4286705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2193546 |
|---|
| End bp | 2194898 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638141513 |
|---|
| Product | sodium:neurotransmitter symporter |
|---|
| Protein accession | YP_757242 |
|---|
| Protein GI | 114570562 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | [TIGR03059] photosystem I protein PsaO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0522104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG TACCAGCCGG TCAGCACGCG CATTGGTCAT CGCGCTTCGC ATTCATTCTT
GCCGCGGTTG GCTCCGCGGT CGGTCTCGGC AATCTCTGGC GTTTCCCGTT CCAGACGGGT
GAAAATGGCG GTTCGGCGTT TGTCCTGATT TATATTGGCT GCGTGGTCTT GTTCGCCCTG
CCGGTCCTGA TTGCGGAAAT CGCGATTGGC CGGCACGCGC AACAATCAGC CATCTCTTCG
ACCCGGAAAA TGGCCCAGGA GGCCGGCAAA TCGGCCAATT GGGCGATCGT CGGCTGGGTC
TGTACGGCAG GTGGTTTCCT TGTGCTGACC ACCTATTCGG TGATCGCGGG CCAGGTCATG
GCCTATGCGG CATCGGGTTT TGCCGGTGGT TTTGCCCAGC CGGATGGCGC CAATCTCTTC
TATCAGGGTG AGTTCATTCA GCTGGCCTGG CATGCCGGCT TCATGCTGAT CACCATCCTG
ATCGTGGCGC GTGGCCTGAA AGGCGGGATC GAGCAGGTTG CGACCTTCCT GATGCCGCTC
TTCTTCGTCA TGCTCATCGG CCTGACGATC TACTCCCTTA TCTCCGGCGC GGCCGGCGAA
GCCATAACCT ACCTGTTCAC GCCTGACTTC ACCGCGGTGA CCGGCAATAC CTTCGTCGCA
GCGCTTGGTC AGGCCTTCTT CTCGGTCTCG GTCGCGTCTG CCATCATGAT CACCTATGGC
TCCTATCTGT CCAAGGACAC GAATATCGGA TCGTCCTCGA TCCTGATCGC CAGCGCTGAT
ACTGCGGTGG CGCTGATCGC GGGCCTGATG ATCTTCCCGA TCGTGTTCAT GGTGGGTATC
GACCCGGGCG CAGGCATGGG CCTGATCTTT ACGGCGCTCC CGGCTGTCTT CGCCGACATG
CCGGCCGGCA ATATCATCGG TGGCGCCTTC TTCGCGCTGG CCTTTATCGC CGCAATCACC
TCGTCGATCT CCCTGCTGGA AGGCACAGTG GCGTTCGTTG AAGAGCACTC CGATTTCTCT
CGCCCGACCG CAGCCTGGCT GCTGGGCTTC TTCGCCTTCA TGATCGGCGC CGGAGCGGTG
TGGTCATCGG AGTTCGGTGG CGTCTTCGTC GACTGGCTGT CCGGAAGCTT CCTGTTGCCG
CTTGGTGGCC TGCTGGTCGC CGTGTTCACC GGCTGGGTCA TTCCCAAAGC CTTGATGCGG
GACGAATTGA GCCATGCCTC CAATGGCCTG TTCGCCTTCT TCCACTTCAG TGTGAAGTTC
ATCGTGCCGC CGGCCATCGG CTTCATCCTG TTGCTGGGCC TCGATGCCAA GTTCAACGGC
GGCAATATCG GTTCGCTGCT CGGCCTCGGC TAG
|
|---|
| Protein sequence | MAAVPAGQHA HWSSRFAFIL AAVGSAVGLG NLWRFPFQTG ENGGSAFVLI YIGCVVLFAL
PVLIAEIAIG RHAQQSAISS TRKMAQEAGK SANWAIVGWV CTAGGFLVLT TYSVIAGQVM
AYAASGFAGG FAQPDGANLF YQGEFIQLAW HAGFMLITIL IVARGLKGGI EQVATFLMPL
FFVMLIGLTI YSLISGAAGE AITYLFTPDF TAVTGNTFVA ALGQAFFSVS VASAIMITYG
SYLSKDTNIG SSSILIASAD TAVALIAGLM IFPIVFMVGI DPGAGMGLIF TALPAVFADM
PAGNIIGGAF FALAFIAAIT SSISLLEGTV AFVEEHSDFS RPTAAWLLGF FAFMIGAGAV
WSSEFGGVFV DWLSGSFLLP LGGLLVAVFT GWVIPKALMR DELSHASNGL FAFFHFSVKF
IVPPAIGFIL LLGLDAKFNG GNIGSLLGLG
|
|---|
| |