Gene Mmar10_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1900 
Symbol 
ID4286418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2077936 
End bp2078277 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID638141400 
Productprotein translocase subunit yajC 
Protein accessionYP_757130 
Protein GI114570450 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.743684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.257956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAT TTCTTCAATC CCCGATCCCG ATGCTCGTCC TCATGGGCCT GGTCTTCTAT 
TTCCTGCTCA TCCGTCCGCA ACAAAAGCGG ATGAAAGAGC ACAAGGAACT GATTGGCGGC
CTCAAGCGCG GTGACGAAGT CATCACCCAG GGCGGCATGA TCGGCAAGAT CGCCAAGGTC
TCCGACGAGG AAGTCACCCT CGACATCGGT GAAGGCGTGA AAGTCCGTAT CGTCCGCTCG
ACCATTGCCG ATGTGAAGGG CCGCACCGCG CCCAAGCCGG CCAATGACGC CAAGTCGGAT
ACCAAGAAAG ACGCCAAGAA GGACGACAAG GAAATCGGCT GA
 
Protein sequence
MQEFLQSPIP MLVLMGLVFY FLLIRPQQKR MKEHKELIGG LKRGDEVITQ GGMIGKIAKV 
SDEEVTLDIG EGVKVRIVRS TIADVKGRTA PKPANDAKSD TKKDAKKDDK EIG