Gene Mmar10_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1870 
Symbol 
ID4284902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2041576 
End bp2042028 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content63% 
IMG OID638141370 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_757100 
Protein GI114570420 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.011662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AACAACTCGT ATTCACGCTT GAAGGCGGCG ACGTCACCAT CAAGCTGCGT 
CCGGATCTGG CACCCAAGCA CGTCGCCCGC ATCACCGAGC TGGCCAAGGA AGGCTTTTAT
GACGGCCTGA CCTTCCACCG CGTGATTGAT GGCTTCGTGG CCCAGGGCGG CTGCCCGAAC
GGCAATGGCA TGGGTGGCTC CGGCCAGCAC ATCCCGGCCG AGTTCTCCGC CGAGAAGCAT
GTCCGCGGCA CAATGTCGAT GGCGCGCGCT TCCGATCCGG ACAGTGCCTC CAGCCAGTTC
TTCATCTGCC TGGATGACGT ACCCTACCTC AACAACCAGT ACACGGTTTG GGGCGAAGTC
ATCTCCGGCA TGGACCATGT CGACGCCCTG CCCAAGGGCG AGCCGCCGGC CAATCCGGGC
GCGATCATCA AGGCGACGGT CGTCGAGGCG TAA
 
Protein sequence
MAEEQLVFTL EGGDVTIKLR PDLAPKHVAR ITELAKEGFY DGLTFHRVID GFVAQGGCPN 
GNGMGGSGQH IPAEFSAEKH VRGTMSMARA SDPDSASSQF FICLDDVPYL NNQYTVWGEV
ISGMDHVDAL PKGEPPANPG AIIKATVVEA