| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1792 |
|---|
| Symbol | rplB |
|---|
| ID | 4285373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1943181 |
|---|
| End bp | 1944017 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638141281 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_757022 |
|---|
| Protein GI | 114570342 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.109634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0522844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTGA AAACATTCAA ACCGACTTCT CCGGGCCGTC GCGCCCTGGT GCTGGTGGAT
CGCTCCGCCC TGCACAAGGG ACGTCCCGAG AAGACACTGG TTGAGGGCCT CACCAAAAAG
GGTGGCCGCA ACAATATGGG TCGGATCACG GCCCGCCGGC GTGGTGGTGG CGCAAAGCGT
CTCTATCGCC TGGTGGACTT CAAGCGCCGC AAGTGGGACA TGCCCGCAAC GGTCGAGCGT
CTTGAGTATG ACCCGAACCG GACGGCTTTC ATCGCCCTCA TCAAGTATGA GGACGGCGAG
AAGGCCTATA TCCTGGCTCC GCAGCGTCTT TCCGAAGGCG ATACGGTCAT CGCGTCCGCA
AAGTGCGACG TGAAGCCGGG CAATGCGATG CCGCTGAAGG CGGTGCCGGT CGGCACCATC
CTTCACAATG TCGAGATGAA GCCGGAGAAG GGTGGTCAGA TCGCCCGTTC CGCCGGTGCC
TATGTCCAGC TTGTCGGCCG TGATGCCGGC TACGCCCAGA TCCGTCTGGC TTCGGGCGAG
CTGCGCATGG TCTCGGACAA GTGCATGGCG ACGGTCGGTG CGGTGTCAAA CCCGGACCAC
CTCAACATCA ATCTCGGCAA GGCCGGTCGC AATCGCCATC TCGGCAAGCG TCCGTCTGTT
CGCGGTGTTG TCATGAACCC GGTTGATCAC CCGCATGGTG GTGGTGAAGG CCGTACCTCT
GGTGGTCGCC ATCCGGTGAC GCCTTGGGGC AAGCCGACCA AGGGTGCCAA GACACGCAAG
AACAAGTCGA CCGACAAGTT CATCATCCGC TCGCGCCACG AGCGCAAGAA GCGATAG
|
|---|
| Protein sequence | MALKTFKPTS PGRRALVLVD RSALHKGRPE KTLVEGLTKK GGRNNMGRIT ARRRGGGAKR
LYRLVDFKRR KWDMPATVER LEYDPNRTAF IALIKYEDGE KAYILAPQRL SEGDTVIASA
KCDVKPGNAM PLKAVPVGTI LHNVEMKPEK GGQIARSAGA YVQLVGRDAG YAQIRLASGE
LRMVSDKCMA TVGAVSNPDH LNINLGKAGR NRHLGKRPSV RGVVMNPVDH PHGGGEGRTS
GGRHPVTPWG KPTKGAKTRK NKSTDKFIIR SRHERKKR
|
|---|
| |