Gene Mmar10_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1789 
Symbol 
ID4284707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1941804 
End bp1942508 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID638141278 
ProductSSU ribosomal protein S3P 
Protein accessionYP_757019 
Protein GI114570339 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.309908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.124892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGA AAGTAAATCC GATCGGTCTG CGCCTTGGCG TCAACCGCAC CTGGGAATCG 
CGTTGGTATG CAGGCGCTGG CGAATACGCC AAGCTGCTGC ACGAAGACAT CAAGATCCGG
AAGATGCTCA AAGAGCGTCT GAAGAATGCC AGTGTCTCGA AGATCGTGAT CGAGCGCCCG
CACAAGAAGT GCCGCGTCAC TGTCCACACG GCCCGTCCGG GTGTGGTGAT TGGCAAGAAG
GGTTCTGACA TCGAGACGCT CCGCAAGGAG CTGTCGAAGA TGATCGATGG TGAAGTTCAC
CTGAACCTGG TTGAAGTGCG TAAGCCGGAG ATCGACGCGG CCCTGGTGGC CGAGTCCATC
GCTCAGCAGC TCGAGCGCCG TGTGGCTTTC CGCCGCGCGA TGAAGCGTTC GATGCAGTCG
GCCATGCGCA TGGGCGCCAA GGGCTGCAAG ATCGTCTGCG GCGGTCGTCT CGGTGGTGCG
GAAATCGCCC GTACCGAGCA GTATAATGAG GGCTCCGTCC CGCTGCATAC GCTGCGCGCC
GACATCGATT ACGGCACCTG CGAAGCCAAG ACCGCGATGG GTATCATCGG TATCAAGGTC
TGGATCTACA AGGGTGAGAT CATGGAACAC GATCCGAACG CCCAGGAGCG CCGTCTCCAG
GAGTCCGGTG AACAGCGCGC CCGCTCGGGC CGCCAAGCCG CGTAA
 
Protein sequence
MGQKVNPIGL RLGVNRTWES RWYAGAGEYA KLLHEDIKIR KMLKERLKNA SVSKIVIERP 
HKKCRVTVHT ARPGVVIGKK GSDIETLRKE LSKMIDGEVH LNLVEVRKPE IDAALVAESI
AQQLERRVAF RRAMKRSMQS AMRMGAKGCK IVCGGRLGGA EIARTEQYNE GSVPLHTLRA
DIDYGTCEAK TAMGIIGIKV WIYKGEIMEH DPNAQERRLQ ESGEQRARSG RQAA