Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1763 |
Symbol | |
ID | 4284314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1925787 |
End bp | 1926779 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638141252 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_756993 |
Protein GI | 114570313 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.397176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG TCCAGACCAT CAAGGTAGAG GCGACCGAAG ACGGTTCGCG CGTTGATCGC TGGTTCAAGC GCCGCTTTCC GCATGTCTCG GCGATCATGG TCCAGAAGCT GTGCCGCAAG GGCCAGATCC GGGTTGATGG CGGGCGCGTG AAGGGCGACA GCCGGGTCCA TGAGGGCCAG GAAATCCGCA TCCCGCCGCT GCCCGAACCC GGTGAACGGC CGCCGGTCAA CCGGATGTCG GATGAGGATA TTGCCTATGT GAAGTCGCTG GTCATCTATC AGGATGACGA GCTGATCGCC TTCAACAAAC CCGCCGGCCT GGCCGTCCAG GGCGGGTCGA AGACGACCCG GCATCTCGAC GGCATGCTGG ACGCCTTCGG TGAGGGGCTC GACCGTCCCC GCCTCGTCCA TCGCCTCGAC AAGGACACCT CCGGCATCCT GATTGTCGGC AAGGGACCCA AGGCGACAGC GCGACTGGCC AAGGCCTTCC AGTCGCACAA GACCCGCAAG ACCTATTGGG CGATCGCCAT CGGCGTACCC AAGCCCAAAA TGGGCGAGAT CAAGGGCTTC ATGCGCAAGG CCGCGGCGTC GGGAGTTGAT AGCGAACGCG AGACCATGGT CGCTGCCGGG CATGGCGATG AGGGTGCCCA GCATGCGCTG ACCCGCTATG TGGTGATCGG TGAAGCGGGG CAGAAAGCCT CCTGGGTGGC GCTACGTCCG GTGACCGGGC GGACCCATCA GCTGCGCGTT CATCTGGCGG CCATGGGGAC GGCGATCCTG GGCGACAAGA AATATACCTG CCACCGCCCG GCGCCGGAAG ATCTGGGCCG CCGCCTGTGC CTGCACGCCC GCCGCCTCGA AATCCCGCGT CCGGGCGGCA AGCCGCTGGT ACTGACCGCC GACCTGCCGC CGGCCTTGAA GAAGATCTAC GACACGCTGG GTTTCTCGGT GAAAGAGATC AGCGAGACGG ATATCGAGGA GGATCTGGCC TAG
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Protein sequence | MSGVQTIKVE ATEDGSRVDR WFKRRFPHVS AIMVQKLCRK GQIRVDGGRV KGDSRVHEGQ EIRIPPLPEP GERPPVNRMS DEDIAYVKSL VIYQDDELIA FNKPAGLAVQ GGSKTTRHLD GMLDAFGEGL DRPRLVHRLD KDTSGILIVG KGPKATARLA KAFQSHKTRK TYWAIAIGVP KPKMGEIKGF MRKAAASGVD SERETMVAAG HGDEGAQHAL TRYVVIGEAG QKASWVALRP VTGRTHQLRV HLAAMGTAIL GDKKYTCHRP APEDLGRRLC LHARRLEIPR PGGKPLVLTA DLPPALKKIY DTLGFSVKEI SETDIEEDLA
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