Gene Mmar10_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1763 
Symbol 
ID4284314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1925787 
End bp1926779 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID638141252 
Productribosomal large subunit pseudouridine synthase C 
Protein accessionYP_756993 
Protein GI114570313 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.397176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG TCCAGACCAT CAAGGTAGAG GCGACCGAAG ACGGTTCGCG CGTTGATCGC 
TGGTTCAAGC GCCGCTTTCC GCATGTCTCG GCGATCATGG TCCAGAAGCT GTGCCGCAAG
GGCCAGATCC GGGTTGATGG CGGGCGCGTG AAGGGCGACA GCCGGGTCCA TGAGGGCCAG
GAAATCCGCA TCCCGCCGCT GCCCGAACCC GGTGAACGGC CGCCGGTCAA CCGGATGTCG
GATGAGGATA TTGCCTATGT GAAGTCGCTG GTCATCTATC AGGATGACGA GCTGATCGCC
TTCAACAAAC CCGCCGGCCT GGCCGTCCAG GGCGGGTCGA AGACGACCCG GCATCTCGAC
GGCATGCTGG ACGCCTTCGG TGAGGGGCTC GACCGTCCCC GCCTCGTCCA TCGCCTCGAC
AAGGACACCT CCGGCATCCT GATTGTCGGC AAGGGACCCA AGGCGACAGC GCGACTGGCC
AAGGCCTTCC AGTCGCACAA GACCCGCAAG ACCTATTGGG CGATCGCCAT CGGCGTACCC
AAGCCCAAAA TGGGCGAGAT CAAGGGCTTC ATGCGCAAGG CCGCGGCGTC GGGAGTTGAT
AGCGAACGCG AGACCATGGT CGCTGCCGGG CATGGCGATG AGGGTGCCCA GCATGCGCTG
ACCCGCTATG TGGTGATCGG TGAAGCGGGG CAGAAAGCCT CCTGGGTGGC GCTACGTCCG
GTGACCGGGC GGACCCATCA GCTGCGCGTT CATCTGGCGG CCATGGGGAC GGCGATCCTG
GGCGACAAGA AATATACCTG CCACCGCCCG GCGCCGGAAG ATCTGGGCCG CCGCCTGTGC
CTGCACGCCC GCCGCCTCGA AATCCCGCGT CCGGGCGGCA AGCCGCTGGT ACTGACCGCC
GACCTGCCGC CGGCCTTGAA GAAGATCTAC GACACGCTGG GTTTCTCGGT GAAAGAGATC
AGCGAGACGG ATATCGAGGA GGATCTGGCC TAG
 
Protein sequence
MSGVQTIKVE ATEDGSRVDR WFKRRFPHVS AIMVQKLCRK GQIRVDGGRV KGDSRVHEGQ 
EIRIPPLPEP GERPPVNRMS DEDIAYVKSL VIYQDDELIA FNKPAGLAVQ GGSKTTRHLD
GMLDAFGEGL DRPRLVHRLD KDTSGILIVG KGPKATARLA KAFQSHKTRK TYWAIAIGVP
KPKMGEIKGF MRKAAASGVD SERETMVAAG HGDEGAQHAL TRYVVIGEAG QKASWVALRP
VTGRTHQLRV HLAAMGTAIL GDKKYTCHRP APEDLGRRLC LHARRLEIPR PGGKPLVLTA
DLPPALKKIY DTLGFSVKEI SETDIEEDLA