Gene Mmar10_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1594 
Symboltdh 
ID4284924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1743115 
End bp1744143 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID638141081 
ProductL-threonine 3-dehydrogenase 
Protein accessionYP_756824 
Protein GI114570144 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.073313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.583452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TGGTCAAAGC CAAGCCGGAA GAAGGCATCT GGATGGAGGA TGTGCCCGAG 
CCGACGATCG GCCCGGACGA TGTGCTCATC AAGATCAAGC GCACGGCGAT CTGCGGCACC
GACATCCATA TCTACAACTG GGATGACTGG GCGGCGAAGA ATGTGCCCAC CCCGATGGTG
GTCGGTCATG AATATGCCGG CGAGATCGTC GATGTCGGCT CGAACGTGAC CCGCGTGAAG
GCCGGCCAGC GTGTGTCGGG TGAAGGGCAT GTCGTTGGCG TCACCAGCCG CGCGGCTCGC
GCCGGACGCT TCCATCTCGA TCCGGAAACC CGCGGCGTCG GCGTCAATAT TCCCGGCGCT
TTCGCCGAAT TCATGAAACT GCCGGCCTTC AATGTCGTGC CGCTGCCCGA GGACGTGCCT
GACGAGATCG GTGCCATTCT CGATCCGCTC GGCAATGCGG TGCACACGGC GCTGCAGTTC
GACATGATCG GCGAGGATGT GCTTATCACC GGCGCCGGAC CGATCGGCAT CATGGCCGCG
GCGATCGCGC GTCATGTCGG CGCCCGCCAT GTCGTGCTGA CCGACATCAA CACGCACCGC
CTGCACCTGG CCGGCCAGGT CGCGCCGAAT ATCCGCACCG TGGATGTCTC GAAAGAGAAG
ATCGAGGATG TCGCGAAAGA ACTCGGCATG ACCGAGGGCT TTGATGTCGG CCTGGAAATG
TCCGGCGCGC CGCAGGCCTT CGGCTCGATG CTCAATAATA TGGTGATGGG CGGCAAGGTC
GCCATGCTCG GTCTGCCGTC CAGGCCGATC GAGGTCGATT TTGGCCAGCT CGTGCTCAAG
GCGATCACGC TGAAAGGCAT TTACGGCCGC GAGATGTTCG AGACCTGGTA CAAGATGATC
GCCATGCTCG AGAGCGGTCT CGACGTCTCG CGCATCATCA CCCACCGCTA CAAGGCTGAC
GAATTCCAGA AGGGTTTCGA CGCCATGCGG GCCGGCAAGT CCGGCAAGGT AATTCTGGAG
TGGGATTGA
 
Protein sequence
MKALVKAKPE EGIWMEDVPE PTIGPDDVLI KIKRTAICGT DIHIYNWDDW AAKNVPTPMV 
VGHEYAGEIV DVGSNVTRVK AGQRVSGEGH VVGVTSRAAR AGRFHLDPET RGVGVNIPGA
FAEFMKLPAF NVVPLPEDVP DEIGAILDPL GNAVHTALQF DMIGEDVLIT GAGPIGIMAA
AIARHVGARH VVLTDINTHR LHLAGQVAPN IRTVDVSKEK IEDVAKELGM TEGFDVGLEM
SGAPQAFGSM LNNMVMGGKV AMLGLPSRPI EVDFGQLVLK AITLKGIYGR EMFETWYKMI
AMLESGLDVS RIITHRYKAD EFQKGFDAMR AGKSGKVILE WD