| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1576 |
|---|
| Symbol | |
|---|
| ID | 4286777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1725557 |
|---|
| End bp | 1725928 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638141063 |
|---|
| Product | DNA-directed RNA polymerase subunit omega |
|---|
| Protein accession | YP_756806 |
|---|
| Protein GI | 114570126 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
|---|
| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.229817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCG TCACTGTCGA AGACTGCATC GAAAAAATTC CCAATCGTTT CCGTCTGGTT
CTGATGGCGG CACATCGTGC CCGCAACATC TCGGCCGGCT CCGAGCTGAC GATTGATCGC
GACAATGACA AGAACCCTGT CGTTGCCCTC CGCGAGATCG CGGACGAAAC CCTCGACATG
GACTCGCTGA AGGACAGCCT GGTCAACGGT CTGCAGCGCG TGCTGCCGAG CGAGGACGAG
GAAGATGCGG CGCGCGAAGA GCGTGGCCAG CAGATGGAAG CCCTGCCGGC ACCGCCGGTC
GAGCTCGACG AAGCCGAGAT GCTCAAGGCC CTCCAGAACG ACCGGGACGG CGCGCCTGAC
GGCCGCCTCT AA
|
|---|
| Protein sequence | MARVTVEDCI EKIPNRFRLV LMAAHRARNI SAGSELTIDR DNDKNPVVAL REIADETLDM
DSLKDSLVNG LQRVLPSEDE EDAAREERGQ QMEALPAPPV ELDEAEMLKA LQNDRDGAPD
GRL
|
|---|
| |