| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1560 |
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| Symbol | |
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| ID | 4285659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 1708681 |
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| End bp | 1709802 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638141047 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_756790 |
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| Protein GI | 114570110 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.198541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAC GCACATTCAT CAGCGGCGGC GCCGTCGCCG CGGCCACGGT TGCCACGGCC
TGCGGTGAAA CCGGCCAGGA CACGTCCGGT GCGCCGGCCG CTCCGAACAT CAATCGCGGT
GTGACCCGCC TGCGCATGGT CACCACCTGG CCGGCCAATT TCCCCGGCCT GGGCACCGCT
GCCAACAATG TCGCCAACTA TATCAACCGC ATGTCGGGCG GGTCGCTGGA AGTGCGCGTC
TACGCCGCCG GCGAGATCGT CTCGGCTTTC GAAGCCTTTG ACGCGGTCTC CGAAGGCACG
GCCGACATGT ATCATGGTGC CGAATACTAC TGGCAGGGCA AGTCACCGGC CTTCAACTTC
TTCACCGCCG TTCCGATGGG CATGACCGCC TATGAAATCA TGGGCTGGGT CGAAGCCGGT
GGCGGCCAGG CGCTGTGGGA CGAACTGTCA GCCGGGTTCA ACATCAAGCC TTTCCAGGCT
GGCAATTCCG GTCACCAGAT GGGTGGCTGG TTCAAGCGCG AGATCAACAC GCTGGAAGAC
TTCCGCGGCC TGCGCATGCG GATTCCGGGG CTTGGCGGCA ATGTACTGCG CGAGCTCGGC
GGCGCGGCGG TCACCCTGTC CGGCGGCGAG ATCTATCCGG CCCTGCAATC GGGCGCGATC
GACGGCACGG AATGGGTCGG CCCGTGGAAT GACCTGGCTT TCGGTTTTTA CCGTGAAGCG
CCCTATTATT ACGGCCCGGG TTTCCATGAA CCGGGTTCCT GCCTGGGTGT CGGCATCAAC
AAGACGGTCT GGGACGGGCT GGCCAGCGAC CACCAGGCGA TCATCGCCTC GGCTTGCCGC
ACGGCGAACA ATATCTCAAT CGCTGAATTC CAGTACCAGA ACGGCATCGC GCTTGATGTG
CTGGTCAATG AACATGGCGT CGAGCTGCGC CAGTTCTCCG ACGAGATCTG GACCCGGATC
GGCACGATCG CGGAACAGGT TGTCGCCGAT ACCGGCAATG CCGACCCGTT CACCCGCCGT
GTCTATGACA GCTATCTTGC GGCCCGTGAC AGCATGCGCA GCTGGGGCCG GATCTCCGAA
ATGCCCTACA TGGTTCAACG CGAACGCGTT CTGGATCGAT AG
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| Protein sequence | MDRRTFISGG AVAAATVATA CGETGQDTSG APAAPNINRG VTRLRMVTTW PANFPGLGTA
ANNVANYINR MSGGSLEVRV YAAGEIVSAF EAFDAVSEGT ADMYHGAEYY WQGKSPAFNF
FTAVPMGMTA YEIMGWVEAG GGQALWDELS AGFNIKPFQA GNSGHQMGGW FKREINTLED
FRGLRMRIPG LGGNVLRELG GAAVTLSGGE IYPALQSGAI DGTEWVGPWN DLAFGFYREA
PYYYGPGFHE PGSCLGVGIN KTVWDGLASD HQAIIASACR TANNISIAEF QYQNGIALDV
LVNEHGVELR QFSDEIWTRI GTIAEQVVAD TGNADPFTRR VYDSYLAARD SMRSWGRISE
MPYMVQRERV LDR
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