| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1533 |
|---|
| Symbol | |
|---|
| ID | 4286059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1684805 |
|---|
| End bp | 1685926 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638141020 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_756763 |
|---|
| Protein GI | 114570083 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0339196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.76292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACA TCCCACTTTC CCCCATCGAG GACGTCATCG AGGATGCGCG CAATGGGCGC
ATGTTCATCC TCGTCGACGC GGAAGACCGC GAGAATGAAG GCGACCTGGT CATCCCGGCC
AAGTTCGCCA CACCGGATGC AGTCAATTTC ATGGCCAAGC ATGGCCGTGG CCTGATCTGC
CTGGCGATGA GCCAGGAGCG GGTCGAACAG CTCGATCTCA AGCTGATGTC CAGTGACAAC
CGGTCCCGCC ACCAGACCGC TTTCACCACC TCGATCGAAG CCCGTGAAGG CGTCACCACC
GGCATTTCCG CCCATGACCG GGCCCGCACC ATCGAGGTCG CGACGGATCC GTCCAAGGGC
GCTGATGATA TCGCGACACC GGGCCATGTC TTCCCGCTGG TCGCCCGCGA TGGCGGCGTG
CTGGTTCGGG CCGGACACAC CGAAGCCTCG GTCGATGTGG CGCGCCTGGC CGGTGCCGGC
TCGGCCGGTG TGATCTGCGA GATCATGAAT GAGGACGGCT CGATGGCGCG CCTGCCTGAT
CTGGTCGCCT TTGCCCAGTT GCACGGTCTG AAGATCGGCA CGATTGCCGA CCTGATCGCC
TATCGCCGCA AGAATGACCG CTTCATCGAG CGCCGGATCG AAAGCGAGTT TTCCTCGCAA
TTCGGGGGGC CGTTCAAGCT CGTCGTCTTC CGCAATACCC TGGACGGGTC CGAGCATGTC
GCCCTGGTCA AGGGGCAACC GAACGCGTCC GAGCCAACTA CTGTGCGCAT GCACAAGGTC
AGCTTCGTCG ATGATGTCCT GCACGAGAGC GGACCGCGTG GCGCCCTGGT CGAAGCCGGT
ATACGCGCAA TTTCCGACGC GGACGGGCCG GCGGTGATGG TCTTCATTCG CGAGACCTCC
CATACCGCCA TCATGGAACG CCTTGGCGCT CATCCTGTTC TGGCCCAGGA CGAACGGGAA
GCTCGCCGCT TGCGCGAATA TGGTGTTGGT GCGCAAATCC TGCTGGATCT GGGGGTGCGC
GACATGGTGC TCCTGTCTAC CAAGCCGCAA ACGATTGTTG GCCTGGACGG CTATGGTCTT
TCCATCCGCG AAGAGCGGCA TTTTCCGGAG GGTGACGCAT GA
|
|---|
| Protein sequence | MSDIPLSPIE DVIEDARNGR MFILVDAEDR ENEGDLVIPA KFATPDAVNF MAKHGRGLIC
LAMSQERVEQ LDLKLMSSDN RSRHQTAFTT SIEAREGVTT GISAHDRART IEVATDPSKG
ADDIATPGHV FPLVARDGGV LVRAGHTEAS VDVARLAGAG SAGVICEIMN EDGSMARLPD
LVAFAQLHGL KIGTIADLIA YRRKNDRFIE RRIESEFSSQ FGGPFKLVVF RNTLDGSEHV
ALVKGQPNAS EPTTVRMHKV SFVDDVLHES GPRGALVEAG IRAISDADGP AVMVFIRETS
HTAIMERLGA HPVLAQDERE ARRLREYGVG AQILLDLGVR DMVLLSTKPQ TIVGLDGYGL
SIREERHFPE GDA
|
|---|
| |